Sequence 1: | NP_001303384.1 | Gene: | vvl / 38752 | FlyBaseID: | FBgn0086680 | Length: | 742 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_599182.1 | Gene: | Pou4f2 / 171355 | RGDID: | 620075 | Length: | 412 | Species: | Rattus norvegicus |
Alignment Length: | 445 | Identity: | 147/445 - (33%) |
---|---|---|---|
Similarity: | 196/445 - (44%) | Gaps: | 136/445 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 SYMTPPSGDLDMALGGGGYHTSSPRSAADAGEMKYMQHHHHHHAAAAAAAHHQLPSSPSPNGQGN 69
Fly 70 GGGLG--------------LGSGSGLGSWS-----ALHPDP------------------------ 91
Fly 92 --WMQTHH-------------THHLPAAAAVASAADTVKQEMSHLSQQTRIQQGMASPHAAWHAP 141
Fly 142 HAGHYAPTGGSPLQYHHAMNG-MLHH--------------------PAHAVAAAHHQSVAPLHHT 185
Fly 186 LRGESPQLHIH---HHMG-GGDRDAISGGEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALG 246
Fly 247 TL----YGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKK 307
Fly 308 RTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 362 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vvl | NP_001303384.1 | POU | 212..286 | CDD:197673 | 47/77 (61%) |
Homeobox | 307..360 | CDD:278475 | 29/52 (56%) | ||
Pou4f2 | NP_599182.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 29..96 | 25/84 (30%) | |
Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q63934 | 94..240 | 30/166 (18%) | |||
POU-IV box | 113..122 | 0/8 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 123..191 | 17/82 (21%) | |||
Nuclear speckle targeting signal. /evidence=ECO:0000250|UniProtKB:Q12837 | 174..188 | 5/21 (24%) | |||
Required for DNA-binding and transcriptional repression. /evidence=ECO:0000250|UniProtKB:Q63934 | 241..412 | 88/176 (50%) | |||
POU | 253..330 | CDD:197673 | 50/86 (58%) | ||
Homeobox | 351..404 | CDD:278475 | 29/52 (56%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350525 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3802 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.740 |