DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and POU5F2

DIOPT Version :10

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_694948.1 Gene:POU5F2 / 134187 HGNCID:26367 Length:328 Species:Homo sapiens


Alignment Length:294 Identity:102/294 - (34%)
Similarity:141/294 - (47%) Gaps:59/294 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 AWHAPHAGHYAPT----GGSP-------------LQYHHAMNGMLHHPAHAVAAAHHQSV----- 179
            |.|.| :.|:.|.    ||.|             |....|...::..||..........|     
Human     2 AGHRP-SNHFCPLPGSGGGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPDVWRIPL 65

  Fly   180 APLHHTLRGE----SPQLHIHHHMGGGD------RDAISG-------------GEEDTPTSDDLE 221
            .||.|..||.    .|:|....   .||      ..|:.|             .|:.:....:|:
Human    66 GPLPHEFRGWIAPCRPRLGASE---AGDWLRRPSEGALPGPYIALRSIPKLPPPEDISGILKELQ 127

  Fly   222 AFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLE--E 284
            ..||:.:|:|:.||::|||||:|:|.|:|.|.||||||||||.|||..||.||:|||:|||:  |
Human   128 QLAKELRQKRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVE 192

  Fly   285 ADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVR 349
            |::..|. ..::.|..|..| .:|.|.|..:..:||:.|.:.|||:.|:|:.:|..|||:|:|||
Human   193 AENLLGL-CKMEMILQQSGK-WRRASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQKDVVR 255

  Fly   350 VWFCNRRQKEKRMT----PPNTLG--GDMMDGMP 377
            |||.||.:...|.|    |...:|  |....|.|
Human   256 VWFYNRSKMGSRPTNDASPREIVGTAGPPCPGAP 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 41/75 (55%)
Homeodomain 305..361 CDD:459649 24/55 (44%)
POU5F2NP_694948.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 8/23 (35%)
Pou 121..192 CDD:459692 40/70 (57%)
Homeodomain <225..261 CDD:459649 19/35 (54%)

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