DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and acj6

DIOPT Version :10

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_061499399.1 Gene:acj6 / 1269382 VectorBaseID:AGAMI1_013946 Length:394 Species:Anopheles gambiae


Alignment Length:345 Identity:122/345 - (35%)
Similarity:166/345 - (48%) Gaps:76/345 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 SWSALHPDPWMQTHHTHHLPAAAAVASAADTVKQEMSHLSQQTRIQQGMASPHAAWHAPHAGHYA 147
            |||..|........:...|..|.|:| |.|..|.:.:|....|:::..:...|.....|.     
Mosquito    55 SWSPRHNGDIFSGLNDGILSRAEALA-AVDIGKHQNNHPQMATQLKHDVMYHHGMGAPPQ----- 113

  Fly   148 PTGGSPLQYHHAMNGM-LHHPAHAVAAAHHQSVAPL---HHTLRGESPQL-HI--HHHM------ 199
                .|||.||.|:|: :..|:.::......:..|:   ||.|.|....: |:  |||.      
Mosquito   114 ----RPLQMHHTMDGIDMLDPSGSMTTLTPMAETPITSSHHQLHGSYHSMNHMMSHHHSSHLGNH 174

  Fly   200 ------GGGDRD----------------------------------AISGGEEDTPTSD-DLEAF 223
                  .|.||:                                  |.:|...||.|.. :||||
Mosquito   175 TPGSTDAGADREHPGAAGSCVSNATYNAIFADGFLGAHHPAMAAAVAAAGLHPDTDTDPRELEAF 239

  Fly   224 AKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEA 285
            |::|||||||||.||||||.||..|.   ....||:||||||:|.||..||..|||:||.|||||
Mosquito   240 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEA 304

  Fly   286 DSTTGS----PTSIDKIAAQGRKR----KKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 342
            ::...:    |.:...:.| |.|:    :|||||....|.:||.:|..||:||.::|.::|:.|.
Mosquito   305 EAQAKNKRRDPDAPSVLPA-GEKKSLFSRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 368

  Fly   343 LEKEVVRVWFCNRRQKEKRM 362
            |:|.||||||||:|||:|||
Mosquito   369 LKKNVVRVWFCNQRQKQKRM 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 48/77 (62%)
Homeodomain 305..361 CDD:459649 29/59 (49%)
acj6XP_061499399.1 None

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