Protein Alignment vvl and Pou6f1

DIOPT Version :9

• Sequence 1: NP_001303384.1
• Gene: vvl / 38752
• FlyBaseID: FBgn0086680
• Length: 742
• Species: Drosophila melanogaster
• Sequence 2: XP_038934171.1
• Gene: Pou6f1 / 116545
• RGDID: 620615
• Length: 615
• Species: Rattus norvegicus
• Alignment Length: 329
• Identity: 110/329 - (33%)
• Similarity: 153/329 - (46%)
• Gaps: 50/329 - (15%)

  Fly    58 LPSSP---SP---NGQGNGGGLGLGSGSGLGSWSALHPDPWMQTHHTHHLPAAAAVASAADTVKQ 116
            :||.|   ||   |.||...|             ||   ||:....:...||.|..........|
  Rat   312 IPSMPGISSPILTNAQGQVIG-------------AL---PWVVNSASVATPAPAQSLQVQAVTPQ 360

  Fly   117 EMSHLSQQTRIQQGMAS-----PHAAWHAPHAGHYAPTGGSPLQYHHAMNG---MLHHPAHAVAA 173
            .:  |:.|.::...:||     |.|..........|.:...|:|...|:..   :|..||.|:..
  Rat   361 LL--LNAQGQVIATLASSPLPQPVAVRKPSTPESPAKSEVQPIQPTQAVPPPAVILTSPAPALKP 423

  Fly   174 AHHQSVAPLHHTLRGESP---QLHIHHHMGGGDRDAISGGEEDTPTSDDLEAFAKQFKQRRIKLG 235
            :   :.||:..|. .|:|   ||....|....|.|.|:        .:::..|||.||.||:.||
  Rat   424 S---ASAPIPITC-SETPTVSQLVSKPHTPSLDEDGIN--------LEEIREFAKNFKIRRLSLG 476

  Fly   236 FTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD--STTGSPTSIDKI 298
            .||..||.||....|..:||:.|||||.|.::.|:..||||:|:|||.||:  :..|....::.:
  Rat   477 LTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQEGQQNLMEFV 541

  Fly   299 AAQ-GRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 362
            ..: .:|||:|||.......||..:|.|.|.|:.||||.:|..|..::||||||||||||..|..
  Rat   542 GGEPSKKRKRRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNT 606

  Fly   363 TPPN 366
            :..|
  Rat   607 SKLN 610

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vvl	NP_001303384.1	POU	212..286	CDD:197673	34/73 (47%)
		Homeobox	307..360	CDD:278475	27/52 (52%)
Pou6f1	XP_038934171.1	PHA03247	<45..430	CDD:223021	33/138 (24%)
		POU	453..527	CDD:197673	36/81 (44%)
		Homeobox	551..605	CDD:395001	27/53 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166350540
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.740