DRSC/TRiP Functional Genomics Resources

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Protein Alignment vvl and POU6F2

DIOPT Version :9

Sequence 1:NP_001303384.1 Gene:vvl / 38752 FlyBaseID:FBgn0086680 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001357888.1 Gene:POU6F2 / 11281 HGNCID:21694 Length:720 Species:Homo sapiens


Alignment Length:447 Identity:112/447 - (25%)
Similarity:161/447 - (36%) Gaps:148/447 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QHHHHHHAAAAAAAHHQLPSSPSPNGQGNGGGLGLGSGSGLGSWSALHPDPWMQTHHTHHLPAAA 105
            |.|..|       :|.|..:.|||..|.:..........|.|..|.|.|...:|..:......||
Human   278 QQHQPH-------SHSQNQNQPSPTQQSSSPPQKPSQSPGHGLPSPLTPPNPLQLVNNPLASQAA 335

  Fly   106 AVASAADTVKQEMSHLSQQTRIQ----------QG--------MASPHAAWHAPHAGHYAPTGG- 151
            |.|:|..::....:..:..:.:|          ||        |.:|     .|.:...:.|.| 
Human   336 AAAAAMSSIASSQAFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNP-----GPSSQAASGTQGL 395

  Fly   152 -------------------------------------SPL----QYHH---------AMNGMLHH 166
                                                 ||:    |.|.         |..|.|.|
Human   396 QVQPITPQLLTNAQGQIIATVIGNQILPVINTQGITLSPIKPGQQLHQPSQTSVGQAASQGNLLH 460

  Fly   167 PAHAVAAAHHQSVAPLHHTLRGESPQLHIHHHMGGGDRDAIS-----------GGEEDTPTSDDL 220
            .||:.|:   .|.:|:.......|         ......|:|           .||.|....:::
Human   461 LAHSQAS---MSQSPVRQASSSSS---------SSSSSSALSVGQLVSNPQTAAGEVDGVNLEEI 513

  Fly   221 EAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC-------------------------- 259
            ..|||.||.||:.||.||..||.||....|..:||:.||                          
Human   514 REFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILRSHFFLPQEAQENTIASSLTA 578

  Fly   260 ----------RFEALQLSFKNMCKLKPLLQKWLEEADS--TTGSPTSIDKIAAQ-GRKRKKRTSI 311
                      |||.|.::.|:..|:||:|::|:.||::  ..|.....:.|.:: .:|||:|||.
Human   579 KLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEARHRAGMQNLTEFIGSEPSKKRKRRTSF 643

  Fly   312 EVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTL 368
            .......|..||.|...||.||:|.:|:.|..::|||||||||:||..|     ||:
Human   644 TPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALK-----NTI 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vvlNP_001303384.1 POU 212..286 CDD:197673 32/109 (29%)
Homeobox 307..360 CDD:278475 25/52 (48%)
POU6F2NP_001357888.1 Pou 506..615 CDD:389985 32/108 (30%)
Homeobox 639..693 CDD:365835 26/58 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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