Protein Alignment Rsph3 and rsph3

DIOPT Version :10

• Sequence 1: NP_648059.1
• Gene: Rsph3 / 38751
• FlyBaseID: FBgn0052392
• Length: 659
• Species: Drosophila melanogaster
• Sequence 2: NP_001082864.2
• Gene: rsph3 / 562259
• ZFINID: ZDB-GENE-040724-173
• Length: 334
• Species: Danio rerio
• Alignment Length: 340
• Identity: 127/340 - (37%)
• Similarity: 187/340 - (55%)
• Gaps: 42/340 - (12%)

  Fly   296 LQQRRSTSNNNNNSSSNISDKRPVVPPPEP---------------YKNVMYDRRVIKGSNFGN-- 343
            ||.:..|.:.....||     ||...|..|               |.|:||||||::|:.:..
Zfish     5 LQAQHETQSGVYTFSS-----RPRAVPNRPKYRQADPSLNEEQSSYGNIMYDRRVVRGNTYAQHI 64

  Fly   344 ASLVTDVDPFD----KAAELRRRNMLRKRTMQCRNQRNVLGTPPPVKGRKHETIQTEKYLEKLVQ 404
            ..:.:..||.:    :..|.|||.|.|:|..:..|.:    ||.|::|||:..:|||.|||:|..
Zfish    65 IPITSQPDPVEFFRQQQQEARRRAMSRRRLKEQFNSK----TPDPLEGRKNIDVQTELYLEELSD 125

  Fly   405 RPPEFTIDTQTDLFLEKPPTPPFIPAKVGVDVATEIGEGELFHFDAEAQPIIDVLVDACIEQSML 469
            |..|.:::.|||.||:||.||.|||||.|.||||:|.|||||.||.|.:|::.|||...|||::|
Zfish   126 RIEEVSVECQTDFFLDKPATPLFIPAKSGRDVATQIEEGELFDFDLEVKPMLQVLVGKTIEQALL 190

  Fly   470 EVAHEMELSSLRRKQEEFLAQREAELAELRRLEAEELRLQAEKERRLRQDAIAKELDAEMQKSVT 534
            ||..|.||.|||.:::.|...|:|||.|::|||..|.||:.|||.|::|.....|.:.|....:.
Zfish   191 EVMEEEELDSLRAQKKAFKEIRDAELVEVQRLEERERRLRVEKENRIKQQKAMLEKEKETADKIA 255

  Fly   535 AAKLLQGHIASLVPEVLENIEPAS---DAVKKEQLMKSVCPWLSAEVAEEVGHIVD----SREIL 592
            |....|.:::.|:|.|..::....   |.|::: :.....|||    .||||:.::    :|.:|
Zfish   256 ARAFAQQYLSDLLPSVYSSLRDCGYFYDPVQRD-IETGFLPWL----MEEVGNTLEKRYVARMVL 315

  Fly   593 TAIIQEIIKQRAEIY 607
            ..:||::..||:|.:
Zfish   316 DMLIQDVTNQRSEAF 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsph3	NP_648059.1	Radial_spoke_3	326..606	CDD:461827	117/292 (40%)
rsph3	NP_001082864.2	Radial_spoke_3	45..329	CDD:461827	117/292 (40%)