Protein Alignment Rsph3 and Rsph3

DIOPT Version :10

• Sequence 1: NP_648059.1
• Gene: Rsph3 / 38751
• FlyBaseID: FBgn0052392
• Length: 659
• Species: Drosophila melanogaster
• Sequence 2: NP_001101933.2
• Gene: Rsph3 / 361476
• RGDID: 1311306
• Length: 571
• Species: Rattus norvegicus
• Alignment Length: 561
• Identity: 173/561 - (30%)
• Similarity: 259/561 - (46%)
• Gaps: 112/561 - (19%)

  Fly   110 PTRPQQAIVRPIRREA-GIADNRDNHV---------GNPPQRSHFSRSNQEVRSFADELSQKLRF 164
            |.:|      |:||.| |.|..||:..         |||..|:                  .|.|
  Rat    11 PGKP------PLRRCARGPAGGRDHKTEEPFSTDQSGNPAGRN------------------CLAF 51

  Fly   165 LAPEEQNYGGRQSAN-SGAWMDPAM---SQRPRFETTVPQGIFL--PPPHEVQMI----PATMLR 219
            |.|     ||....: :||....::   .:.||...|...|...  |.|.|.:::    |.....
  Rat    52 LPP-----GGTSGCSATGAGATDSLQVPGRNPRVPVTYCWGTLASRPLPREPRLLRSHHPCPWHY 111

  Fly   220 RHVYAY--SSYPMILQGYLTKETGSESKEQKVTATRLNGLRATAAVAAATAAASKSSRNDTQSLA 282
            .||.:|  |..|...:.:|.:                .|..:|..:|:|     .:.||...:.|
  Rat   112 LHVSSYEDSLAPTCFRAHLHR----------------RGRGSTPNMASA-----MTDRNPRAAEA 155

  Fly   283 GGLHITKAQFQQQLQQRRSTSNNNNNSSSNISDKRPVVPPPEP---YKNVMYDRRVIKGSNFG-- 342
            .|.:...::.:....|||...::             ::.|.|.   |.|:|||||||:|:.:.
  Rat   156 SGTYTYTSRPRAVACQRRRYRDS-------------ILQPVEESMNYGNIMYDRRVIRGNTYALP 207

  Fly   343 NASLVTDVDPFD--KAAELRRRNMLRKRTMQCRNQRNVLGTPPPVKGRKHETIQTEKYLEKLVQR 405
            ...:....||.:  :..:.|||.:.|||..|....|    ||.||:||||..:|||.|||::..|
  Rat   208 TGQVPGQPDPLELQQQQQARRRALARKRAQQQLRPR----TPEPVEGRKHVDVQTELYLEEIADR 268

  Fly   406 PPEFTIDTQTDLFLEKPPTPPFIPAKVGVDVATEIGEGELFHFDAEAQPIIDVLVDACIEQSMLE 470
            ..|..::.|||.||::||||.|||||.|.||||:|.|||||.||.|.:|:::|||...|||::||
  Rat   269 IVEIDMECQTDAFLDRPPTPLFIPAKTGKDVATQILEGELFDFDLEVKPMLEVLVGKTIEQALLE 333

  Fly   471 VAHEMELSSLRRKQEEFLAQREAELAELRRLEAEELRLQAEKERRLRQDAIAKELDAEMQKSVTA 535
            |..|.||::||..|..:...|..||||::|||.:|.|.:.|||||.||.........|..:.::|
  Rat   334 VMEEEELANLRASQYAYEEIRNVELAEVQRLEEQERRHREEKERRKRQQWEIVHKQNETSQKISA 398

  Fly   536 AKLLQGHIASLVPEVLENIEPAS---DAVKKEQLMKSVCPWLSAEVAEEVGHIVDSREILTAIIQ 597
            ....|.::|.|:|.|.:::..:.   |.:::: :.....|||..||.:.:.|.:..|.:|..:|:
  Rat   399 RAFAQRYLADLLPSVFDSLRNSGYFYDPIERD-IEVGFLPWLLNEVEKTMEHSMVGRTVLDMLIR 462

  Fly   598 EIIKQRAEIYAGYKE-----------PESEPSGPDAGVCEE 627
            |::::|...|.. ||           |....:.||..|..|
  Rat   463 EVVERRINDYES-KEAAQPAQRSDDVPNDPNTVPDPSVSLE 502

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsph3	NP_648059.1	Radial_spoke_3	326..606	CDD:461827	116/286 (41%)
Rsph3	NP_001101933.2	Radial_spoke_3	189..468	CDD:461827	110/288 (38%)