DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8549 and SDO1

DIOPT Version :9

Sequence 1:NP_001261482.1 Gene:CG8549 / 38749 FlyBaseID:FBgn0035714 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_013122.1 Gene:SDO1 / 850709 SGDID:S000004012 Length:250 Species:Saccharomyces cerevisiae


Alignment Length:242 Identity:106/242 - (43%)
Similarity:155/242 - (64%) Gaps:12/242 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTNVSKGQAAKKDE 71
            |:.||:||||::|||||..||||:|||:|||..:|...|||:|||||.|.||.|||||..|.|::
Yeast     6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLVANKED 70

  Fly    72 LQKAFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEK 136
            |||.|..|:..::.:||:.|||:|:||||||..|:...|.::..|:|.|:||.:::.||.::|.|
Yeast    71 LQKCFGTTNVDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHK 135

  Fly   137 SLKDAHFSVKMNRNTKQNTLEAIKIL--KDHMPIERSRMKLRVSFAGKEGGGKLKESVVKLANAV 199
            :|::..||..:|:..|...|||||:|  |..:||.|::||::|:.:......:|.|.:.||..:.
Yeast   136 ALQELKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPSRQPELIEKISKLIASS 200

  Fly   200 EHE----EWDEATLHLTLLIDPGQYRVIDELVRNETKGKGLLELLEL 242
            ..|    |.|..|  .|.||||..||.:..|...    ||.:::|::
Yeast   201 PGESTKPELDPWT--CTGLIDPVNYRDLMTLCDK----KGTVQVLDM 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8549NP_001261482.1 PTZ00448 4..>226 CDD:185627 102/224 (46%)
SDO1NP_013122.1 RNA_SBDS 9..244 CDD:129392 105/239 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346708
Domainoid 1 1.000 113 1.000 Domainoid score I1350
eggNOG 1 0.900 - - E1_COG1500
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6438
Inparanoid 1 1.050 183 1.000 Inparanoid score I945
Isobase 1 0.950 - 0 Normalized mean entropy S584
OMA 1 1.010 - - QHG54247
OrthoFinder 1 1.000 - - FOG0004811
OrthoInspector 1 1.000 - - oto99011
orthoMCL 1 0.900 - - OOG6_101125
Panther 1 1.100 - - LDO PTHR10927
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1300
SonicParanoid 1 1.000 - - X3393
TreeFam 1 0.960 - -
1615.740

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