DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sbds and Sbds

DIOPT Version :10

Sequence 1:NP_648057.2 Gene:Sbds / 38749 FlyBaseID:FBgn0035714 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_317609.4 Gene:Sbds / 3291609 VectorBaseID:AGAMI1_004351 Length:288 Species:Anopheles gambiae


Alignment Length:252 Identity:163/252 - (64%)
Similarity:201/252 - (79%) Gaps:2/252 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTNVSKGQ 65
            |.|||||||||||||||:||:|||||||||||||||||||||.:|||:||||||..||.|||||:
Mosquito    36 MPKIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVLSWRSGAEKDLDEVLQTIAVFNNVSKGE 100

  Fly    66 AAKKDELQKAFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYP 130
            .|||:||||||.|.|.||||||||:||||||||||||..||:....|..:||..||||||:||||
Mosquito   101 VAKKEELQKAFGKDDVTEICKEILAKGELQVSEKERQDQLDSMFKEIATTVADKCVNPETKRPYP 165

  Fly   131 ASIIEKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSFAGKEGGGKLKESVVKL 195
            .||||||:||.|:|:|.:||.||..|:.|::|:|.:|:||::|:|:::...|| ..:|||.:.||
Mosquito   166 VSIIEKSMKDIHYSIKPHRNAKQQALDVIRLLRDTIPLERAKMRLKLALPAKE-AKRLKERIAKL 229

  Fly   196 ANAV-EHEEWDEATLHLTLLIDPGQYRVIDELVRNETKGKGLLELLELKEVVESEEL 251
            ::.| |.|||:...|.||.|||||.:|.:||::|.||||.|.||:|.|||:.|.||:
Mosquito   230 SSTVTEGEEWEGERLMLTCLIDPGHFREMDEIIRTETKGAGALEVLNLKEIKEGEEV 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbdsNP_648057.2 PTZ00448 4..>226 CDD:185627 145/222 (65%)
SbdsXP_317609.4 None

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