DRSC/TRiP Functional Genomics Resources

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Protein Alignment velo and elaD

DIOPT Version :10

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_416772.1 Gene:elaD / 946742 ECOCYCID:G7176 Length:403 Species:Escherichia coli


Alignment Length:286 Identity:59/286 - (20%)
Similarity:91/286 - (31%) Gaps:93/286 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1160 RFEITEPVCFTTKGVRIAGILKDKDEKFELNIHK---------QEVIKVIAHFGNVEPAQPLVTL 1215
            :|.:||.:..:.|...::|    .:|..|| :|.         :|...::.|.......:.|..:
E. coli    24 KFTVTEELLQSLKKTALSG----DEESIEL-LHNIALGYDKFGKEAEDILYHIVRTPTNETLSII 83

  Fly  1216 YLLKTCAEYVKNQLKLPDDQH-HEHTGFKTHSYHTRRLILLFDSISVSARGNIKSMFSCVDEISS 1279
            .|:|...      |||.:..| ..::..|:|....    |||..:...:    |.|....|||..
E. coli    84 RLIKNAC------LKLYNLAHIATNSPLKSHDSDD----LLFKKLFSPS----KLMTIIGDEIPL 134

  Fly  1280 TDAAEILERIADSDRKTQ--------DKSSQPPPRQLRADEQVSLLMYPPKGTGGLCIRMEDFVC 1336
            ....:.|.::..:|...:        ||:     |||..||                     ..|
E. coli   135 ISEKQSLSKVLLNDENNELSDGTNFWDKN-----RQLTTDE---------------------IAC 173

  Fly  1337 LTKESYLNDIIIDFYLLWLRNTLIPEPQRERTHIFSTFFYKRLTTLTRPADMKQTAAQKRHARVQ 1401
                 ||..|..:     .:||.:..|         |..|...:|.|...|    |..:......
E. coli   174 -----YLQKIAAN-----AKNTQVNYP---------TGLYVPYSTRTHLED----ALNENIKSDP 215

  Fly  1402 KWTKGVDIFDKDFIIVPINEQSHWFL 1427
            .|...|.:|       |||...||.|
E. coli   216 SWPNEVQLF-------PINTGGHWIL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:420019 21/86 (24%)
elaDNP_416772.1 PRK11836 1..403 CDD:183334 59/286 (21%)

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