DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment velo and ULP2

DIOPT Version :9

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_012233.1 Gene:ULP2 / 854780 SGDID:S000001293 Length:1034 Species:Saccharomyces cerevisiae


Alignment Length:984 Identity:197/984 - (20%)
Similarity:322/984 - (32%) Gaps:343/984 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   988 KRK--SYVP----KNSAASSPASSSSSEPVSAVPTAADKKRELAAARFNNKMAGANFAVGVGVRG 1046
            |||  |..|    .:|.||||.||:|..|........|.|   .....||...            
Yeast     5 KRKFNSLKPLDTLNSSRASSPRSSASLPPKRYNTFRKDPK---IVDHLNNAST------------ 54

  Fly  1047 RGSMAMRGGRARGGRRVPEVDPVVLLSSEDEAEG-GEGTSDSSNQPTNNSKLNSNGNLHELS--A 1108
            :..:.:....:...|::...|..|  .:.||.|| ..|.||...:|..:|.|..:.:|...|  .
Yeast    55 KDFLPVLSMNSESKRQIELSDNDV--DNNDEGEGVNSGCSDQDFEPLQSSPLKRHSSLKSTSNGL 117

  Fly  1109 AFPCEPNLPEIDEEPLYKDFSRGDVRDLSDIPEADQFSASL-------------------KCSCV 1154
            .|....||.....||.....|          |.....|..|                   |..|:
Yeast   118 LFQMSNNLGNGSPEPAVASTS----------PNGSIISTKLNLNGQFSCVDSKTLRIYRHKAPCI 172

  Fly  1155 -----------------RLVPYRFEI-----TEPVCFTTKGVRIAGILKDKDE------------ 1185
                             :.|.|..::     .|.:....|...:|.||||..:            
Yeast   173 MTFVSDHNHPKFSLYFQQSVIYNSQVNLLDDVELIILDKKNSFMAIILKDLKKVKMILDVNNSSI 237

  Fly  1186 -----------------------------------KFELNIHKQEVIKVIAHFGNVEPAQPLVTL 1215
                                               |.|:..||:::::.:.|.  :.|.......
Yeast   238 NINTNILIWSTASSASNKKIKSIKRFLLMSYSSSIKVEILDHKEQILERLKHL--IHPISSSSPS 300

  Fly  1216 YLLKTCAEYVKN----------QLKLPDDQHHE-HTGFKTHSYH-----TRRLILLF-----DSI 1259
            ..::......||          :|...||:..: ||.|.::..|     |:|..:..     .||
Yeast   301 LNMERAINSTKNAFDSLRLKKTKLSTNDDESPQIHTHFLSNKPHGLQSLTKRTRIASLGKKEHSI 365

  Fly  1260 SVSARGNIKSMFSCVDEISSTDAAEILERIADSD--RKTQDKSSQPPPR---QLRADEQVSLLMY 1319
            || .:.||..     .:..:|:..|.|:..|.|.  |..:.|....|..   ....|:..:....
Yeast   366 SV-PKSNISP-----SDFYNTNGTETLQSHAVSQLRRSNRFKDVSDPANSNSNSEFDDATTEFET 424

  Fly  1320 PPKGTGGLC----------IRMEDFVCLTKESYLNDIIIDFYLLWLRNTLIPEP--QRERTHIFS 1372
            |......||          |..:||.||..:.::||.|:||:..:...:.|.:.  :||:.|:.|
Yeast   425 PELFKPSLCYKFNDGSSYTITNQDFKCLFNKDWVNDSILDFFTKFYIESSIEKSIIKREQVHLMS 489

  Fly  1373 TFFYKRLTTLTRPADMKQTAAQKRHARVQKWTKGVDIFDKDFIIVPINEQSHWFLAIICYPNLKG 1437
            :|||.:|  ::.|||.        ::.|:||....|:|.|.::::|||...|||..||  .||..
Yeast   490 SFFYTKL--ISNPADY--------YSNVKKWVNNTDLFSKKYVVIPINISYHWFSCII--TNLDA 542

  Fly  1438 PVTFDTNQPVEPQQLKRPRGKKVALQIGNTTITPLTKRAEGGQLPAALTAENVCRIADDESERDE 1502
            .:.|..|:                                                         
Yeast   543 ILDFHQNK--------------------------------------------------------- 550

  Fly  1503 AEGDESDMASEDSENSNSAKEPAATPTSTTASTPSLSSSQPTATGPARNIASDDVPAVKQPL--I 1565
               |::|.                                         |.||:: ::..||  |
Yeast   551 ---DKNDA-----------------------------------------INSDEI-SINNPLVNI 570

  Fly  1566 LIFDSLAGASRSRVVATLRDYLTCEYRVKKPDAQAHVFNKDNMPGHCVKVPQQNNFTDCGLYLLQ 1630
            |.||||. .:.||.:..::::| ..|.:.|...|   .:|..:......||||.|.:|||::::.
Yeast   571 LTFDSLR-QTHSREIDPIKEFL-ISYALDKYSIQ---LDKTQIKMKTCPVPQQPNMSDCGVHVIL 630

  Fly  1631 YVEQFFGEP-----------IRDYRLPIKQLTNWFDFLTVTKKREDIANLIQQLMDEGNQQQRLI 1684
            .:.:||..|           |:......|.:..:||.......|:::.:.::.|       |...
Yeast   631 NIRKFFENPVETIDVWKNSKIKSKHFTAKMINKYFDKNERNSARKNLRHTLKLL-------QLNY 688

  Fly  1685 LPVIEFPTLNGQLVEYPEDTESAEFEEEEGHDDEDPASEMHD-------ENNAGTDMEVDPVNEE 1742
            :..::...|..::::. |:.:|......|.:||:|...::.:       :|||       .:..|
Yeast   689 ISYLKKENLYEEVMQM-EEKKSTNINNNENYDDDDEEIQIIENIDQSSKDNNA-------QLTSE 745

  Fly  1743 PALAGKTAALAPASTTAAAPTGKRFVLKRRLHNGAVSSPTNGNGEASSNGGALIPQLVSTAAATT 1807
            |..:..::    .|||...||        .|||..|..||   ||..::.    ...|..|:..|
Yeast   746 PPCSRSSS----ISTTEREPT--------ELHNSVVRQPT---GEIITDN----EDPVRAASPET 791

  Fly  1808 TGVSSGVAH 1816
            ..||..:.|
Yeast   792 ASVSPPIRH 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:304959 31/93 (33%)
ULP2NP_012233.1 ULP1 45..695 CDD:227489 150/807 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I1447
eggNOG 1 0.900 - - E1_COG5160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6692
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000929
OrthoInspector 1 1.000 - - otm46731
orthoMCL 1 0.900 - - OOG6_102905
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1602
SonicParanoid 1 1.000 - - X756
TreeFam 00.000 Not matched by this tool.
87.780

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