DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment velo and ESD4

DIOPT Version :10

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_567478.1 Gene:ESD4 / 827269 AraportID:AT4G15880 Length:489 Species:Arabidopsis thaliana


Alignment Length:681 Identity:124/681 - (18%)
Similarity:211/681 - (30%) Gaps:281/681 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   983 FPEPPKRKSYVPKNSAASSPASSSSS-EPVSAVPTA-ADKKRELAAARFNNKMAGANFAVGVGVR 1045
            |....||:.....:..:..||||:.: ..:|..|.| |..:||:.|.                  
plant    32 FQASKKRRFSFAMSEDSGKPASSNPTISRISRYPDAKAPLRREIHAP------------------ 78

  Fly  1046 GRGSMAMRGGRARGGRRVPEVDPVVLLSSEDEAE-----------GGEGTSDSSNQPTNNSKLNS 1099
            .||  .:|.|:|:..... |.|....:...|:|:           .|:...|..::......::.
plant    79 SRG--ILRYGKAKSNDYC-EKDANFFVRKYDDAKRSALEALRFVNKGKDFVDLGDEVEKEEVVSD 140

  Fly  1100 NGNLHELSAAFPCEPNLPEIDEEP--LYKDFSRGDVRDLSDIPEADQFSASLKCSCVRLVPYRFE 1162
            :.::..:. ...|:.     |||.  |...||.|    ::|:.:.:.|              |.|
plant   141 DSSVQAIE-VIDCDD-----DEEKKNLQPSFSSG----VTDVKKGENF--------------RVE 181

  Fly  1163 ITEPVCFTTKGVRIAGILKDKDEKFELNIHKQEVIKVIAHFGNVEPAQPLVTLYLLKTCAEYVKN 1227
            .|        .:.:..:..|:|..                    ..|..|.....|...||  |.
plant   182 DT--------SMMLDSLSLDRDVD--------------------NDASSLEAYRKLMQSAE--KR 216

  Fly  1228 QLKLPDDQHHEHTGFKTHSYHTRRLILLFDSISVSARGNIKSMFSCVD-------EISSTDAAEI 1285
            ..||      |..||:        ::|....:|:..:...|::...|:       .::..:.||:
plant   217 NSKL------EALGFE--------IVLNEKKLSLLRQSRPKTVEKRVEVPREPFIPLTEDEEAEV 267

  Fly  1286 LERIADSDRKTQDKSSQPPPRQLRADEQVSLLMYPPKGTGGLCIRMEDFVCLTKESYLNDIIIDF 1350
            ....:..:|           |::.|..:.|          .:.|..|...|||..::|||.:|:.
plant   268 YRAFSGRNR-----------RKVLATHENS----------NIDITGEVLQCLTPSAWLNDEVINV 311

  Fly  1351 YLLWLRNTLIPEPQRE-RTHIFSTFFYKRLTTLTRPADMKQTAAQKRHARVQKWTK----GVDIF 1410
            ||..|:.....||::. :.|.|:|||||:|.          :.:......|::||.    |..:.
plant   312 YLELLKERETREPKKYLKCHYFNTFFYKKLV----------SDSGYNFKAVRRWTTQRKLGYALI 366

  Fly  1411 DKDFIIVPINEQSHWFLAIICYPNLKGPVTF-DTNQPVEPQQLKRPRGKKVALQIGNTTITPLTK 1474
            |.|.|.|||:...||.||:|  .|.:..:.: |:...|:|..|     ..:|..:|:        
plant   367 DCDMIFVPIHRGVHWTLAVI--NNRESKLLYLDSLNGVDPMIL-----NALAKYMGD-------- 416

  Fly  1475 RAEGGQLPAALTAENVCRIADDESERDEAEGDESDMASEDSENSNSAKEPAATPTSTTASTPSLS 1539
                                    |.:|..|.:.|..|.|.|                       
plant   417 ------------------------EANEKSGKKIDANSWDME----------------------- 434

  Fly  1540 SSQPTATGPARNIASDDVPAVKQPLILIFDSLAGASRSRVVATLRDYLTCEYRVKKPDAQAHVFN 1604
                                                                           |.
plant   435 ---------------------------------------------------------------FV 436

  Fly  1605 KDNMPGHCVKVPQQNNFTDCGLYLLQYVEQF 1635
            :|        :|||.|..|||:::|:|::.|
plant   437 ED--------LPQQKNGYDCGMFMLKYIDFF 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:420019 32/96 (33%)
ESD4NP_567478.1 PLN03189 1..489 CDD:215622 124/681 (18%)

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