DRSC/TRiP Functional Genomics Resources

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Protein Alignment velo and Senp2

DIOPT Version :10

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:XP_008767027.1 Gene:Senp2 / 78973 RGDID:708378 Length:593 Species:Rattus norvegicus


Alignment Length:596 Identity:123/596 - (20%)
Similarity:204/596 - (34%) Gaps:172/596 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   868 SASELISRAEES--------------LQMNRSQENQAAVAGAAAAANSNPATTSASPAYAQANAA 918
            |:|.|.|.|.::              .|:..|..|.|::.|......:.|..:||.         
  Rat    32 SSSSLFSTAVDTDEIPAKRPRLDCFIHQVKNSLYNAASLFGFPFQLTTKPMVSSAC--------- 87

  Fly   919 AEQAKREAASSAS--GNTVVGTVSSAGSAGATPSEGRKLIDGFLAVCQLCGFTGVDHARCERCKR 981
              ...|..|.|..  .|:....::::||..:....|.|..:|.....::    .|..|| ::.:|
  Rat    88 --NGTRNVAPSGEVFSNSPSCELTTSGSCSSMLKLGNKSPNGISDYPKI----RVTVAR-DQPRR 145

  Fly   982 VFPE---PPKRKSYVPKNSAASSPASSSSSEPVSAVPTAADKKRELAAARFNNKMAGANFAVGVG 1043
            |.|.   ..|.:.|    :...|....|.|.|.|::|.   |.:|.......::..|.      |
  Rat   146 VLPSFGFTLKSEGY----NRRPSGRRHSKSNPESSLPW---KPQEQGVTEMISEEGGK------G 197

  Fly  1044 VRGRGSMAMRGGRARGGRRVPEVDPVVLLSSEDEAEGGEGT------SDSSNQPTNNSKLNSNGN 1102
            .| |....:..|..:..|.      ..|...|...||..|:      |..|:|.|....|.:.|.
  Rat   198 AR-RPHCTVEEGVQKDERE------KYLKLLERLKEGAHGSTFPPAVSHHSSQRTQMDTLKTKGW 255

  Fly  1103 LHELSAAFPCEPNLPEIDEEPLYKDFSRGDVRDLSDIPEADQFSASLKCSCVRLVPYRFEITE-- 1165
            :.|                       ....||                  ...|||.::.:.|  
  Rat   256 MEE-----------------------QNHGVR------------------TTHLVPKQYRVVETR 279

  Fly  1166 -PVCFTTKGVRIAGILKDKDEKFELNIHKQEVIKVIAHFGNVEPAQPLVTLYLLKTCAEYVKNQL 1229
             |:|......|.:....|.::...|...|.   ....|  .:||           ..:|.|..:|
  Rat   280 GPLCSVRSEKRYSKGKADTEKVVGLRFEKD---GTRGH--QLEP-----------DLSEEVSARL 328

  Fly  1230 KLPDDQHHEHTGFKTHSYHTRRLILLFDSISVSARGNIKSMFSCVDEISSTDAAEILER--IADS 1292
            :|         |..::....|::.:|        ....|:..|...:..:.|..|:.|.  |.|.
  Rat   329 RL---------GSGSNGLLRRKISVL--------EAKEKNFPSKEKDRRTEDLFELTEHRLIQDM 376

  Fly  1293 DRKTQDKSSQPPPRQLRADEQVSLLMYPPKGTGGLCIRMEDFVCLTKESYLNDIIIDFYLLWLRN 1357
            :::..:.....||     ||.:|       ....|.|...|...|....:|||.:|:||:    |
  Rat   377 EKEISNALGHGPP-----DEILS-------SAFKLRITRGDIQTLKNYHWLNDEVINFYM----N 425

  Fly  1358 TLIPEPQRE---RTHIFSTFFYKRLTTLTRPADMKQTAAQKRHARVQKWTKGVDIFDKDFIIVPI 1419
            .|:...:::   ..|..|||||.:|.:             ..:..|::|||||::||::.::|||
  Rat   426 LLVERSKKQGYPALHALSTFFYPKLKS-------------GGYQAVKRWTKGVNLFDQELVLVPI 477

  Fly  1420 NEQSHWFLAII 1430
            :.:.||.|.::
  Rat   478 HRKVHWSLVVM 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:420019 29/92 (32%)
Senp2XP_008767027.1 Peptidase_C48 <372..588 CDD:420019 40/146 (27%)

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