DRSC/TRiP Functional Genomics Resources

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Protein Alignment velo and Senp2

DIOPT Version :9

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:XP_008767027.1 Gene:Senp2 / 78973 RGDID:708378 Length:593 Species:Rattus norvegicus


Alignment Length:596 Identity:123/596 - (20%)
Similarity:204/596 - (34%) Gaps:172/596 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   868 SASELISRAEES--------------LQMNRSQENQAAVAGAAAAANSNPATTSASPAYAQANAA 918
            |:|.|.|.|.::              .|:..|..|.|::.|......:.|..:||.         
  Rat    32 SSSSLFSTAVDTDEIPAKRPRLDCFIHQVKNSLYNAASLFGFPFQLTTKPMVSSAC--------- 87

  Fly   919 AEQAKREAASSAS--GNTVVGTVSSAGSAGATPSEGRKLIDGFLAVCQLCGFTGVDHARCERCKR 981
              ...|..|.|..  .|:....::::||..:....|.|..:|.....::    .|..|| ::.:|
  Rat    88 --NGTRNVAPSGEVFSNSPSCELTTSGSCSSMLKLGNKSPNGISDYPKI----RVTVAR-DQPRR 145

  Fly   982 VFPE---PPKRKSYVPKNSAASSPASSSSSEPVSAVPTAADKKRELAAARFNNKMAGANFAVGVG 1043
            |.|.   ..|.:.|    :...|....|.|.|.|::|.   |.:|.......::..|.      |
  Rat   146 VLPSFGFTLKSEGY----NRRPSGRRHSKSNPESSLPW---KPQEQGVTEMISEEGGK------G 197

  Fly  1044 VRGRGSMAMRGGRARGGRRVPEVDPVVLLSSEDEAEGGEGT------SDSSNQPTNNSKLNSNGN 1102
            .| |....:..|..:..|.      ..|...|...||..|:      |..|:|.|....|.:.|.
  Rat   198 AR-RPHCTVEEGVQKDERE------KYLKLLERLKEGAHGSTFPPAVSHHSSQRTQMDTLKTKGW 255

  Fly  1103 LHELSAAFPCEPNLPEIDEEPLYKDFSRGDVRDLSDIPEADQFSASLKCSCVRLVPYRFEITE-- 1165
            :.|                       ....||                  ...|||.::.:.|  
  Rat   256 MEE-----------------------QNHGVR------------------TTHLVPKQYRVVETR 279

  Fly  1166 -PVCFTTKGVRIAGILKDKDEKFELNIHKQEVIKVIAHFGNVEPAQPLVTLYLLKTCAEYVKNQL 1229
             |:|......|.:....|.::...|...|.   ....|  .:||           ..:|.|..:|
  Rat   280 GPLCSVRSEKRYSKGKADTEKVVGLRFEKD---GTRGH--QLEP-----------DLSEEVSARL 328

  Fly  1230 KLPDDQHHEHTGFKTHSYHTRRLILLFDSISVSARGNIKSMFSCVDEISSTDAAEILER--IADS 1292
            :|         |..::....|::.:|        ....|:..|...:..:.|..|:.|.  |.|.
  Rat   329 RL---------GSGSNGLLRRKISVL--------EAKEKNFPSKEKDRRTEDLFELTEHRLIQDM 376

  Fly  1293 DRKTQDKSSQPPPRQLRADEQVSLLMYPPKGTGGLCIRMEDFVCLTKESYLNDIIIDFYLLWLRN 1357
            :::..:.....||     ||.:|       ....|.|...|...|....:|||.:|:||:    |
  Rat   377 EKEISNALGHGPP-----DEILS-------SAFKLRITRGDIQTLKNYHWLNDEVINFYM----N 425

  Fly  1358 TLIPEPQRE---RTHIFSTFFYKRLTTLTRPADMKQTAAQKRHARVQKWTKGVDIFDKDFIIVPI 1419
            .|:...:::   ..|..|||||.:|.:             ..:..|::|||||::||::.::|||
  Rat   426 LLVERSKKQGYPALHALSTFFYPKLKS-------------GGYQAVKRWTKGVNLFDQELVLVPI 477

  Fly  1420 NEQSHWFLAII 1430
            :.:.||.|.::
  Rat   478 HRKVHWSLVVM 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:304959 29/92 (32%)
Senp2XP_008767027.1 Peptidase_C48 <372..588 CDD:304959 40/146 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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