DRSC/TRiP Functional Genomics Resources

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Protein Alignment velo and senp3a

DIOPT Version :10

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_001098584.1 Gene:senp3a / 564950 ZFINID:ZDB-GENE-030131-2303 Length:535 Species:Danio rerio


Alignment Length:519 Identity:112/519 - (21%)
Similarity:185/519 - (35%) Gaps:140/519 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1019 DKKRELAAARFNNKM---AGANFAVGVGVRGRG-----SMAMRG---GRARGGRR---------- 1062
            |....||...::|::   ||...|.|.|..|.|     :||...   ...:.|||          
Zfish     3 DSGSSLAQTHWSNELTLTAGQEGAGGGGAIGGGHLMNPAMAQHAPSPAHFKLGRREEDVRMWGAD 67

  Fly  1063 --VPEVDPVVLLSSEDEAEGGEGTSDSSNQPTNNSKLNSNGNLH------ELSAAFPCEPNLPEI 1119
              ||||        |||.|..|...:...:..:...|...|..|      :.....|....:.|:
Zfish    68 YTVPEV--------EDEEEEEEEEEEDDVEMESGEDLEDQGIFHLQDQGDDKDWGTPEHSQVAEM 124

  Fly  1120 DEEPLYKDFSRG---------DVRDLSDIPEADQFSASLKCSCVRLVPYRFEITEPVCFTTKGVR 1175
            |.. :..||:..         .||.|:.:|...:          |.:..||.:.:......:..:
Zfish   125 DVR-VTDDFTHCMAQRRPRLLKVRRLARLPNRGR----------RYLSIRFRLAQHWRTWRQRAK 178

  Fly  1176 IAGILKDKDEKFELNIHKQEVIKVIAHFG-------------NVEPAQPLVTLYLLKTCAEYVKN 1227
            .||.:..:..:   ..|::.      :||             |.:|...|....:..:|:  ...
Zfish   179 WAGTMGYRRVR---RCHRRR------YFGSQHFQRPPGRSLLNGDPEGRLQGTEISDSCS--TNG 232

  Fly  1228 QLKLPDDQH------HEHTGFKTHSYHTRRLILLFDSISVSARGNIKSMFSCV----DEISSTDA 1282
            .||..|..|      .|.....|:....|....|.:.:|       ....|||    ||......
Zfish   233 ALKGRDGLHGAVLGEREGRASPTNVQSQREKASLQNQLS-------SEHISCVQGILDEFLQQYG 290

  Fly  1283 AEILERIADSDRKTQD---KSSQPPPRQLRADEQVSLLMYPPKGTGGLCIR------------ME 1332
            :.|...:.:...|.|:   :|...|.|::....   |:....:.:|...:|            |:
Zfish   291 SLIPIHVDEVVEKLQEIFTESFSSPHRKIMVQH---LMQSYQRMSGSAMMRGFRVNYKRHVLVMD 352

  Fly  1333 DFVCLTKESYLNDIIIDFYLLWLRNTLIPEPQRERTHIFSTFFYKRLTTLTRPADMKQTAAQKRH 1397
            |...|..:::|||.:::.|     ..|:.:...|:.|.|::|||.:|.|             |.:
Zfish   353 DLTTLYGQNWLNDQVMNMY-----GDLVMDAAPEKVHFFNSFFYDKLRT-------------KGY 399

  Fly  1398 ARVQKWTKGVDIFDKDFIIVPINEQSHWFLAIICYPNLKGPVTFDTNQPVEPQQLKRPRGKKVA 1461
            ..|::|||.||||.|.|:::||:.:.||.|..:..|  :..||:..:|    :.|.|...|.:|
Zfish   400 EGVKRWTKNVDIFQKKFLLIPIHLEVHWSLVCVNVP--QRSVTYFDSQ----RTLNRRCPKHIA 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:420019 29/91 (32%)
senp3aNP_001098584.1 SENP3_5_N <259..349 CDD:466160 17/99 (17%)
Peptidase_C48 361..533 CDD:397169 37/121 (31%)

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