DRSC/TRiP Functional Genomics Resources

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Protein Alignment velo and Senp18

DIOPT Version :10

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_001002834.1 Gene:Senp18 / 408222 RGDID:1303230 Length:475 Species:Rattus norvegicus


Alignment Length:407 Identity:87/407 - (21%)
Similarity:148/407 - (36%) Gaps:112/407 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1086 DSSNQPTNNSKLNSNGNLHELSAAFP-----CEPNLPEIDEEP---------------LYK---- 1126
            ::|.|......|:.||...|..|..|     |:.....:.::|               |.|    
  Rat    14 EASEQRRKRKHLDQNGTETESEALGPEPSRNCQDGAQMVFQKPGKARKKTHQEHQDQKLNKEQPG 78

  Fly  1127 --------DFSRGDVRDLSDIPEADQFSASLKCSCVRLVPYRFEITEPVCFTTKGVRIAGILKDK 1183
                    |...|:::.|..:|:......|.:....|..||                  .:|::|
  Rat    79 KGQGQKTQDEGSGNIKPLEGLPDQAVVEKSTEGGKCRKRPY------------------SVLQEK 125

  Fly  1184 DEKFELNIHKQEVIKVI-AHFGNVEPAQPLVTLYLLKTCAEYVKNQLKLPDDQHHEHTGF----- 1242
            .:..:...|.:.:..:. .|....:|.:|..|.      ::...|:..:|...|...|..     
  Rat   126 PQSPQNEKHARSLEHLQGGHPVRSDPHRPHPTF------SDTSNNKGGMPGHPHGRETAHGDRQP 184

  Fly  1243 KTHSYHTRRLILLFDSISVSARGNIKSMFSCVDEISSTDAAEIL---------ERIA----DSDR 1294
            .|....|:|.....:...|  |||     |....:..|..|.||         :::|    :.:.
  Rat   185 STEVLSTKREKRCAEEKCV--RGN-----SLEHGLPGTANANILDSGGGRLLPDKVAVVAGEKNA 242

  Fly  1295 KTQDKSSQPPPRQLRADEQVSLLMYPPK-----GTG-GLCIRMEDFVCLTKESYLNDIIIDFY-- 1351
            ..:.:::|........:::|...:.|..     .|| .|.|...|...|....:|||.:|:||  
  Rat   243 LPEQENNQEKEFTKEMEKEVEKALGPGAQEEILSTGFKLKITRGDMQTLKNGQWLNDEVINFYMN 307

  Fly  1352 LLWLRNTLIPEPQRERTHIFSTFFYKRLTTLTRPADMKQTAAQKRHA---RVQKWTKGVDIFDKD 1413
            ||..||   ..|.....|.||||||.:|                :|.   .|::||:|:::|:|:
  Rat   308 LLVQRN---ENPGYPALHAFSTFFYAKL----------------KHGGYNSVKRWTRGINLFEKE 353

  Fly  1414 FIIVPINEQSHWFLAII 1430
            .|:|||:::.||.|.:|
  Rat   354 LILVPIHQRVHWSLVVI 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:420019 34/94 (36%)
Senp18NP_001002834.1 Peptidase_C48 <244..470 CDD:420019 43/146 (29%)

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