DRSC/TRiP Functional Genomics Resources

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Protein Alignment velo and Senp18

DIOPT Version :9

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_001002834.1 Gene:Senp18 / 408222 RGDID:1303230 Length:475 Species:Rattus norvegicus


Alignment Length:407 Identity:87/407 - (21%)
Similarity:148/407 - (36%) Gaps:112/407 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1086 DSSNQPTNNSKLNSNGNLHELSAAFP-----CEPNLPEIDEEP---------------LYK---- 1126
            ::|.|......|:.||...|..|..|     |:.....:.::|               |.|    
  Rat    14 EASEQRRKRKHLDQNGTETESEALGPEPSRNCQDGAQMVFQKPGKARKKTHQEHQDQKLNKEQPG 78

  Fly  1127 --------DFSRGDVRDLSDIPEADQFSASLKCSCVRLVPYRFEITEPVCFTTKGVRIAGILKDK 1183
                    |...|:::.|..:|:......|.:....|..||                  .:|::|
  Rat    79 KGQGQKTQDEGSGNIKPLEGLPDQAVVEKSTEGGKCRKRPY------------------SVLQEK 125

  Fly  1184 DEKFELNIHKQEVIKVI-AHFGNVEPAQPLVTLYLLKTCAEYVKNQLKLPDDQHHEHTGF----- 1242
            .:..:...|.:.:..:. .|....:|.:|..|.      ::...|:..:|...|...|..     
  Rat   126 PQSPQNEKHARSLEHLQGGHPVRSDPHRPHPTF------SDTSNNKGGMPGHPHGRETAHGDRQP 184

  Fly  1243 KTHSYHTRRLILLFDSISVSARGNIKSMFSCVDEISSTDAAEIL---------ERIA----DSDR 1294
            .|....|:|.....:...|  |||     |....:..|..|.||         :::|    :.:.
  Rat   185 STEVLSTKREKRCAEEKCV--RGN-----SLEHGLPGTANANILDSGGGRLLPDKVAVVAGEKNA 242

  Fly  1295 KTQDKSSQPPPRQLRADEQVSLLMYPPK-----GTG-GLCIRMEDFVCLTKESYLNDIIIDFY-- 1351
            ..:.:::|........:::|...:.|..     .|| .|.|...|...|....:|||.:|:||  
  Rat   243 LPEQENNQEKEFTKEMEKEVEKALGPGAQEEILSTGFKLKITRGDMQTLKNGQWLNDEVINFYMN 307

  Fly  1352 LLWLRNTLIPEPQRERTHIFSTFFYKRLTTLTRPADMKQTAAQKRHA---RVQKWTKGVDIFDKD 1413
            ||..||   ..|.....|.||||||.:|                :|.   .|::||:|:::|:|:
  Rat   308 LLVQRN---ENPGYPALHAFSTFFYAKL----------------KHGGYNSVKRWTRGINLFEKE 353

  Fly  1414 FIIVPINEQSHWFLAII 1430
            .|:|||:::.||.|.:|
  Rat   354 LILVPIHQRVHWSLVVI 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:304959 34/94 (36%)
Senp18NP_001002834.1 Peptidase_C48 <244..470 CDD:304959 43/146 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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