DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment velo and CG32110

DIOPT Version :9

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_729837.1 Gene:CG32110 / 317858 FlyBaseID:FBgn0052110 Length:411 Species:Drosophila melanogaster


Alignment Length:563 Identity:111/563 - (19%)
Similarity:178/563 - (31%) Gaps:238/563 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly  1118 EIDEEPLYKDFSRGDVRDLSDIPEADQFSASLKCSCVRLVPYRFE---------ITEPVCF---- 1169
            ||.|:..|.|..   .::..|.|.|       |...|...|..|:         :.|.:.|    
  Fly     7 EIVEKSRYFDLI---TKECQDYPMA-------KTMPVLKQPENFQEQEEDVVMAVQEKLKFFRKL 61

  Fly  1170 TTKGVRIAGILKDKDEKFELNIHKQ--EVIKVIAHFGNVEPAQPLV-----------TLYLLKTC 1221
            |:.|..:...|| ..||.::. ||:  :|:|.:.....:..|.|.|           :|:|....
  Fly    62 TSNGPAVPTPLK-VVEKEDIG-HKEIPKVVKKVDRKTKLLQAIPAVFKHSHNRRFRRSLFLRSNY 124

  Fly  1222 AEYV------KNQL--KLPDDQH-------HEHTGFKTHSYHTRRLILLFDSISVSARGNIKSMF 1271
            .|..      ||:|  |..::.|       ||....:...|  ::|||             |...
  Fly   125 IEQFRRWTDQKNKLNRKRLNEAHQLCLKAKHERIACEIDRY--KKLIL-------------KQSV 174

  Fly  1272 SCVDEISSTDAAEILERIADSDRKTQDKSSQPPPRQLRADEQVSLLMYPPKGTGGLCIRMEDFVC 1336
            ..:::|..  ::|::....:...:..:.|..|.       :||.:..:      .|.|...|...
  Fly   175 HVIEDIRI--SSELIPLTKEHHDRLMELSKYPL-------QQVIVAKF------NLDICGSDIKI 224

  Fly  1337 LTKESYLNDIIIDFYLLWLRNTLIPEPQRE-----RTHIFSTFFYKRLTTLTRPADMKQTAAQKR 1396
            ||...:|||.||:||:    |.|:...::.     ..:..||||..||             .|..
  Fly   225 LTSGGWLNDKIINFYM----NLLVERSEKRPGTVPSVYAMSTFFVPRL-------------LQSG 272

  Fly  1397 HARVQKWTKGVDIFDKDFIIVPINEQ-SHWFLAIICYPNLKGPVTFDTNQPVEPQQLKRPRGKKV 1460
            ...|::||:.||:|..|.|:||:::. .||.|.||..| .|..:.:::....:|..::       
  Fly   273 FDGVKRWTRKVDLFSMDLILVPVHQMLVHWCLVIIDLP-AKTMLYYNSRGRGDPNLMR------- 329

  Fly  1461 ALQIGNTTITPLTKRAEGGQLPAALTAENVCRIADDESERDEAEGDESDMASEDSENSNSAKEPA 1525
                      .|.|..:                                |.|||.          
  Fly   330 ----------ALVKYLQ--------------------------------MESEDK---------- 342

  Fly  1526 ATPTSTTASTPSLSSSQPTATGPARNIASDDVPAVKQPLILIFDSLAGASRSRVVATLRDYLTCE 1590
                                                  |.|..|                  |.|
  Fly   343 --------------------------------------LGLCLD------------------TSE 351

  Fly  1591 YRVKKPDAQAHVFNKDNMPGHCVKVPQQNNFTDCGLYLLQYVE 1633
            :|::  |||              .||||:|..|||:::..:.|
  Fly   352 FRIE--DAQ--------------NVPQQDNMNDCGVFVCMFAE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:304959 31/97 (32%)
CG32110NP_729837.1 Peptidase_C48 230..400 CDD:280975 58/298 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5160
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.