DRSC/TRiP Functional Genomics Resources

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Protein Alignment velo and ulp2

DIOPT Version :9

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_593475.2 Gene:ulp2 / 2542268 PomBaseID:SPAC17A5.07c Length:638 Species:Schizosaccharomyces pombe


Alignment Length:498 Identity:131/498 - (26%)
Similarity:194/498 - (38%) Gaps:171/498 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1269 SMFSCVDEISSTDAAEILERIADSDRKTQDK---------------------------SSQPPPR 1306
            |:.|.....:|.....:|.||.:|::.:.::                           .||...:
pombe   261 SLPSSPTPFNSNSGDSLLSRIKNSNQSSSERPTANNGAQEQNQSSSSAGNTSNDFSTLCSQGSDK 325

  Fly  1307 QLRADEQ-VSLLMYPPKGTGGLCIRMEDFVCLTKESYLNDIIIDFYLLWL---RNTLIPEPQRER 1367
            .|.:|.. .::|:||..||..:.|...|...|.:..:|||.|:||||.:|   ..|..|....: 
pombe   326 TLLSDASCTTILVYPFSGTNSIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLAND- 389

  Fly  1368 THIFSTFFYKRLTTLTRPADMKQTAAQKRHARVQKWTKGVDIFDKDFIIVPINEQSHWFLAIICY 1432
            ||||:||||.|||  ::..|.|:..    |..|:|||:.||:|.|.:|||||||..||:||||| 
pombe   390 THIFNTFFYNRLT--SKDKDGKRLG----HRGVRKWTQKVDLFHKKYIIVPINETFHWYLAIIC- 447

  Fly  1433 PNLKGPVTFDTNQPVEPQQLKRPRGKKVALQIGNTTITPLTKRAEGGQLPAALTAENVCRIADDE 1497
                   ..|...||:                        ||..|                    
pombe   448 -------NIDRLMPVD------------------------TKLEE-------------------- 461

  Fly  1498 SERDEAEGDESDMASEDSENSNSAKEPAATPTSTTASTPSLSSSQPTATGPARNIASDDVPAVKQ 1562
                           :|....:|.::|:|:.|         ..::.|:..||             
pombe   462 ---------------QDEIVMSSVEQPSASKT---------RQAELTSNSPA------------- 489

  Fly  1563 PLILIFDSLAGASRSRVVATLRDYLTCEYRVKKPDAQAHVFNKDNMPGHCVKVPQQNNFTDCGLY 1627
              ||||||||...:. .:..||:||..|...:|   ..|:.:.| :.|...|||||:||:|||:|
pombe   490 --ILIFDSLANLHKG-ALNYLREYLLEEAFERK---NVHLKSTD-IRGFHAKVPQQSNFSDCGIY 547

  Fly  1628 LLQYVEQFFGEP-----------IRDYRLPIKQLTNWFDFLTVTKKREDIANLIQQLMDE---GN 1678
            .|.:||.|...|           :|  |...|.....::...:...|.|:..||::|..|   .|
pombe   548 ALHFVELFLETPEQVIANTLDKSLR--RTDAKNFDQQWNLQKINTMRCDLKGLIRRLSTEWSSNN 610

  Fly  1679 QQQRLILPVIEFPTLNGQLVEYPEDTESAEFEEEEGHDDEDPA 1721
            ::|.|                     .|...:||:..:|:|.|
pombe   611 ERQSL---------------------SSGSNDEEDKENDDDLA 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:304959 47/94 (50%)
ulp2NP_593475.2 ULP1 25..592 CDD:227489 116/435 (27%)
EB1_binding <230..312 CDD:283565 7/50 (14%)
Peptidase_C48 361..595 CDD:280975 98/338 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1230
eggNOG 1 0.900 - - E1_COG5160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I1292
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000929
OrthoInspector 1 1.000 - - otm47183
orthoMCL 1 0.900 - - OOG6_102905
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1602
SonicParanoid 1 1.000 - - X756
TreeFam 00.000 Not matched by this tool.
87.880

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