DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment velo and ulp-5

DIOPT Version :9

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_491952.1 Gene:ulp-5 / 186900 WormBaseID:WBGene00006740 Length:311 Species:Caenorhabditis elegans


Alignment Length:414 Identity:86/414 - (20%)
Similarity:141/414 - (34%) Gaps:146/414 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1295 KTQDKSSQPPPRQL-----RADEQVSLLMYPPKGTGGLCIRMEDFVCLTKESYLNDIIIDFYLL- 1353
            |...|...||.::|     |..::..::  ||....|...|.||      .:.|||.||:||:. 
 Worm     5 KLTPKCEAPPEKRLAHLEIRFKDRRHII--PPLFHNGWVGRNED------RTLLNDTIIEFYMCD 61

  Fly  1354 WLRNTLIPEPQRERTHIFSTFFYKRLTTLTRPADMKQTAAQK-----RHARVQKWTKGVDIF-DK 1412
            |:|..:..|..|..:|:|.:||..::.|..:  |.|:...::     .:.|..:.....:.| .|
 Worm    62 WMRLEVFDEATRASSHVFHSFFLPKIKTCFK--DFKENPPRRSELANHYNRFFRSKNDAETFLKK 124

  Fly  1413 DFIIVPI--NEQSHWFLAIICYPNLKGPVTFDTNQPVEPQQLKRPRGKKVALQIGNTTITPLTKR 1475
            |.:::|:  ::..||||.|:..|:  |.|.                      :|.:..|...|.:
 Worm   125 DILLIPVHLDKPKHWFLVIVHNPS--GAVR----------------------RISDVNILDATNK 165

  Fly  1476 AEGGQLPAALTAENVCRIADDESERDEAEGDESDMASEDSENSNSAKEPAATPTSTTASTPSLSS 1540
            .:..:|...:|....|                       .||:...:                  
 Worm   166 VKSRRLSRRITGHVNC-----------------------DENAGECR------------------ 189

  Fly  1541 SQPTATGPARNIASDDVPAVKQPLILIFDSLAGASRSRVVAT---------LRDYLTCEYRVKKP 1596
                                    |:|.|||..:.:.|.|..         :|.:|.........
 Worm   190 ------------------------IIIMDSLVHSKKYREVIDKTHDSTFDHIRLWLLMSAAATDV 230

  Fly  1597 DAQAHVFNKDNMPGHCVKVPQQNNFTDCGLYLLQYVEQFFGEPIRDYRLPIKQLTNW----FDFL 1657
            |.....|.|    ..|.|:|||.|..|||::::.:.|.|           .|..|.|    .|.|
 Worm   231 DMFCTRFRK----VVCQKLPQQKNSVDCGIFMMAFAEYF-----------TKYNTAWQSLPTDAL 280

  Fly  1658 TVTKKREDIANLI-----QQLMDE 1676
            ...|..:||.:|:     :|.:||
 Worm   281 ADLKMDDDIKSLLNSETPRQRLDE 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:304959 28/100 (28%)
ulp-5NP_491952.1 Peptidase_C48 50..302 CDD:367240 72/357 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6692
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

Return to query results.
Submit another query.