DRSC/TRiP Functional Genomics Resources

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Protein Alignment velo and Semp2l2b

DIOPT Version :9

Sequence 1:NP_648056.1 Gene:velo / 38748 FlyBaseID:FBgn0035713 Length:1833 Species:Drosophila melanogaster
Sequence 2:NP_444494.1 Gene:Semp2l2b / 114671 MGIID:2149738 Length:495 Species:Mus musculus


Alignment Length:401 Identity:85/401 - (21%)
Similarity:149/401 - (37%) Gaps:120/401 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1060 GRRVPEVDPVVLLSSEDE--------AEGGEGTSDSSNQPTNNSKLNSNGNLHELSAAFPCEPNL 1116
            |:...:::|:.|.....|        |:||:|.....:....|.:.........|.....|:.::
Mouse    80 GKTPKQLEPLELTEGSPEQVVTGRKPADGGKGHKRPYSVMEENEQSPQKEKYGRLLQHLQCDQDV 144

  Fly  1117 PEIDEEP------LYK------DFSRGDVRDLSDIPEADQFSASLKCSCVRLVPYRFEITEPVCF 1169
            ......|      .:|      :.|||..|..|| .|.....|..:|    |.|   |..|..|.
Mouse   145 SSDPHRPHPFLTNTWKIKGGESEDSRGSERTQSD-REPSTVVALKEC----LSP---EEREKCCS 201

  Fly  1170 TTKGVRIAGILKDKDEKFELNIHKQEVIKVIAHFGN-VEPAQPLVTLYLLKTCAEYVKNQLKLPD 1233
            ..|.|                ..|::.||.....|| :||..|       .|.|:.:.:      
Mouse   202 EEKCV----------------TEKKDCIKGEGRRGNSLEPDLP-------GTQAQIILD------ 237

  Fly  1234 DQHHEHTGFKTHSYHTRRLILLFDSISVSARGNIKSMFSCVDEISSTDAAEILERIADSDRKTQD 1298
                  :|.....:..:..:|..:...::.||..:.|            .:||:...|.:::.::
Mouse   238 ------SGKGNSLFPNKVAVLAAEKKPITDRGKGREM------------DQILDITEDMEKEIEN 284

  Fly  1299 KSSQPPPRQL---RADEQVSLLMYPPKGTGGLCIRMEDFVCLTKESYLNDIIIDFYLLWLRNTLI 1360
            .....|..::   |...|:|      :|         |...|....:|||.:|:||:    |.|:
Mouse   285 ALGPGPQEEILSSRFKLQIS------RG---------DIQTLENGQWLNDEVINFYM----NLLV 330

  Fly  1361 PEPQRE---RTHIFSTFFYKRLTTLTRPADMKQTAAQKRH---ARVQKWTKGVDIFDKDFIIVPI 1419
            ...:.:   ..|:||||||.:|                :|   :.|::||:|:::|:|:.|:|||
Mouse   331 ERNENQGYPALHVFSTFFYPKL----------------KHGGYSSVKRWTRGINLFEKELILVPI 379

  Fly  1420 NEQSHWFLAII 1430
            :::.||.|.:|
Mouse   380 HQRVHWSLVVI 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veloNP_648056.1 Peptidase_C48 1342..>1434 CDD:304959 31/95 (33%)
Semp2l2bNP_444494.1 Peptidase_C48 <272..490 CDD:304959 40/154 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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