DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dikar and YPL216W

DIOPT Version :9

Sequence 1:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster
Sequence 2:NP_015108.1 Gene:YPL216W / 855885 SGDID:S000006137 Length:1102 Species:Saccharomyces cerevisiae


Alignment Length:574 Identity:104/574 - (18%)
Similarity:197/574 - (34%) Gaps:175/574 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IPCISHFCSLFSSAFD--LPDIDIEDLESAL--LSDGTSDEDQVALVPELIVRLLKGCDA----L 73
            :|...:|.:|....:|  ...:.|:|....|  |.|..|:..  :.:.||:.::.|.|:.    |
Yeast   618 LPLSMNFVNLGDELWDNFRKRLSIKDKIDVLWVLVDFASNFS--SYIKELVDKVPKLCNGIRLKL 680

  Fly    74 QTVAKEITHSNYQMFLRRFLRQQCRLHQ--TENHFDTDI---DFQSLPVRKRLHILHDLCHFRLD 133
            .:..||......|  |:...:.:.:||.  :.|.:.:|.   ...:|.| |..:::.|:..    
Yeast   681 DSAKKEYIKLKRQ--LKTLTKNRVKLHSNVSMNRYGSDECKGKVNALKV-KIAYLMEDIAF---- 738

  Fly   134 SVDVQVILSNLEADSLRVEPLGYDAKNSGYWYFYGTRLYREDKATGGSASSSSGSGSGGAGASTG 198
             ::.::|.|:::    |:|.||.|...:.|::.                 .|:||          
Yeast   739 -LEAKLIQSDIK----RLEILGKDRNGNRYYWM-----------------DSNGS---------- 771

  Fly   199 GASNSKGIGSNGTVWQVICF------TEED--------------WQNLAAKFKTSTNAKERELFN 243
                |..|..........||      :|.|              |: |.||.|.:..| .:|:|:
Yeast   772 ----SSAISEKNEELYNCCFLWVQGPSEADINFCLDVDVESLKKWE-LLAKAKGTAYA-TKEVFS 830

  Fly   244 ILDDNFLPKLPQLFRERE----RLRRRKLLQVRNSSRIRNIAELKARQEEERQRRERENL----- 299
            |            ||..:    ::.:.:...:.||:.|.....:.|..:::......|.|     
Yeast   831 I------------FRSTDGSYYQIAQGENFMIINSNGILMRPTIPAFIDKKIISETPEKLLLSHH 883

  Fly   300 ----YQDRQNAHWLAPPQQQQQQQQQQQQQ-----------QQQSQQRTRRRSQSTST------- 342
                :.|.::.|.|.......::.:.|.::           ..:.|.:.:||.:...|       
Yeast   884 QWAFFNDIEDIHMLVDRLDDLRENEGQLKKALTSKMDRIEVSYKQQFKIKRRIECDETFKKNHKL 948

  Fly   343 -ASGISTYASSLR-RTTTTNSSEFLCHRETFCLSPENDEDD-------------DDDDEALDAEQ 392
             .:...|:....| .||.|::.:...:.|.........::|             .:.:.||..:|
Yeast   949 LKNNEFTFPELKRIETTCTSNGQHFSNMEKISKKLSRTKNDLVLEAILKDVAHLGECERALLKKQ 1013

  Fly   393 QS-DQP-----EQQRQQEEQPPEEEQRQEPEELLAVSATDDDFRSPEAPKSQTPAELKSKSSHHH 451
            |: ..|     ||.|..:.:...|.:|:..|::|                    .:|.:...:.|
Yeast  1014 QNLIYPLNFHFEQLRTIDLEFIVETKRKRQEDIL--------------------TKLLNHQRYKH 1058

  Fly   452 HHHHHKKKKSSKKQKKRHHRD-KGRERDREHHHHHRRRHKHASEADEGEDDNNN 504
            ..|......||::..|..|.| :|...:.|.....|||          ||:..|
Yeast  1059 ISHVSGYGISSQRVDKAAHLDVQGILEEIECQLISRRR----------EDEERN 1102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dikarNP_001261480.1 WHIM1 100..148 CDD:292246 9/52 (17%)
Bromo_gcn5_like 892..991 CDD:99941
YPL216WNP_015108.1 WAC_Acf1_DNA_bd 26..124 CDD:287503
DDT 375..435 CDD:214726
WHIM1 626..667 CDD:292246 10/42 (24%)
WHIM2 750..793 CDD:292247 13/73 (18%)
WHIM3 885..923 CDD:292248 4/37 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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