DRSC/TRiP Functional Genomics Resources

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Protein Alignment dikar and AT1G18950

DIOPT Version :9

Sequence 1:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster
Sequence 2:NP_001321622.1 Gene:AT1G18950 / 838476 AraportID:AT1G18950 Length:756 Species:Arabidopsis thaliana


Alignment Length:677 Identity:133/677 - (19%)
Similarity:246/677 - (36%) Gaps:189/677 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DIQSWWEIPCISHFCSLFSSAFDL-PDIDIEDLESALL--SDGTSDEDQVALVPELIVRLLKGCD 71
            :::|.||:..:.:|..:|.....: .:...|:.|:|||  :|..||         :.:.|||...
plant   132 NLRSMWELASVLNFLHVFRPLLKINAEFSAEEFETALLTPNDTLSD---------IHIPLLKAIP 187

  Fly    72 ALQTVAKEITHSNYQMFLRRFLRQQCRLHQTENHFDTDID-------------FQSLPVRKRLHI 123
            .:..:|  :|...:...|.|.:| .|.      |:..:.|             :::|....|:.|
plant   188 PVTRMA--LTRDTWVTVLCRKIR-DCW------HWVAEGDLPIVALQGREIEVYKNLDPAIRVVI 243

  Fly   124 LHDLCHFRLDSVDVQVILSN-----LEADSLRVEPLGYDAKNSGYWY----FYGTRLYREDKATG 179
            |..||..|::..|::..:.|     :.....|.:.:|.|:....:||    ..|.|||||.:...
plant   244 LKALCDIRVEQEDIRSYIDNSLKTGVHLSVFRKDRVGGDSHGVNFWYEEDPLIGHRLYREIRKAE 308

  Fly   180 GSASSSSGSGSGGAGASTGGASNSKGIGSNGTVWQVICFTEEDWQNLAAKFKTSTNAKERELFNI 244
            .....:.|               ||.:.:....|:.:....:::|:::.|...|::..|..|...
plant   309 VLKVKTKG---------------SKILPNITYQWETVATNFDEFQDVSEKLLQSSSRIEVSLGKK 358

  Fly   245 LDDNFLPKLPQLFRERERLRRRKLL--QVRNSSRIRNIA--------ELKARQ------------ 287
            |..:.||::     |:|..|:.|||  |.|.:..:.|..        .|:.|:            
plant   359 LVKDMLPEI-----EKEHKRKEKLLKKQHRQALLLDNFVVVDGLAGRSLRDRKPVRYTFDDYDKS 418

  Fly   288 ---------------EEERQRRERENL-----YQDRQNAHWLAPPQQQ--------------QQQ 318
                           |....|||...|     .:...:.|...|....              .:.
plant   419 INDAIKITKKKHPSPEHPLHRRESARLDALANGRSTSSTHPTEPVNDTASGRSSDFADYDDFDEH 483

  Fly   319 QQQQQQQQQQSQQRTRRRSQSTSTASGISTYASSLRRTTTTNSSEFLCHRETFCLSPENDEDDDD 383
            :.:...::|.:..|.|:|.|..|        |:....|.:.|..||              :.|||
plant   484 RDESLDRRQDTVNRRRQRPQRYS--------ATDFVETVSDNEVEF--------------QSDDD 526

  Fly   384 -------DDEALDAEQQ-----SDQPEQQRQQEE--------QPPEEEQRQEPEELLAVSATDDD 428
                   |:|.|...:|     ..:.::::..||        :..|||:.:|.|:.|:.|..|.|
plant   527 IYGEAVYDEEYLKKRKQKKLSSGSEGDEEKGDEEYKWDEDNAEYEEEEEEEEEEDSLSASEEDSD 591

  Fly   429 --FRSPEAPKSQTPAELKSKSSHHHHHHHHKKKKSSKKQKKRHHRDKGRERDREHHHHHRRRHKH 491
              .|:.:.|:.:|  :|:|:|:.........|:.:....::....|..:|..      ...:.|.
plant   592 EPRRAKKMPRRET--KLRSRSNDFRPGLRRSKRATRIDYQQYEFSDSDKEAT------GLAKRKR 648

  Fly   492 ASEADEGEDDNNNHNSNSNSNSNTNSISSNNSVQPKRRRSGQQQQH---HQQAETT--------- 544
            ..|.||..|:..|.:....|..     |..|:..|: .:||::::.   :..|:||         
plant   649 FVEPDEPSDETGNGDFTMGSQD-----SEENANDPE-TKSGEEEEPRDVNDNADTTNGKENNQLN 707

  Fly   545 EPSTSLSPEDKENFCRQLQLLDTNSAA 571
            :.:.:...|:.|....:.:.||.|..|
plant   708 KSNGTTDQEEVEGVVGKRRYLDLNELA 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dikarNP_001261480.1 WHIM1 100..148 CDD:292246 11/65 (17%)
Bromo_gcn5_like 892..991 CDD:99941
AT1G18950NP_001321622.1 DDT 138..186 CDD:397084 14/56 (25%)
WHIM1 <232..262 CDD:406127 8/29 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14296
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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