DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dikar and Brd8

DIOPT Version :9

Sequence 1:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster
Sequence 2:NP_001348065.1 Gene:Brd8 / 78656 MGIID:1925906 Length:954 Species:Mus musculus


Alignment Length:546 Identity:115/546 - (21%)
Similarity:198/546 - (36%) Gaps:164/546 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   515 TNSISSN------NSVQPKRRRSG-------------QQQQHHQQAETTEPSTSLSPED------ 554
            |.|:.||      ||::.:..|||             ..::....||..:.:.|.:.|:      
Mouse   425 TVSMDSNEISMIINSIKEECFRSGVAEAPGGSKAPSIDGKEDLDLAEKMDIAVSYTGEELDFETV 489

  Fly   555 -------KENFCRQLQLLDTNSAAIAVATSIAD-----LSLPSPVAHESETEQDEQVDQPAVVEA 607
                   ::......::||.  ||:..|.|..:     .|||.|..|..:.|:|:.|..||    
Mouse   490 GDIIAIIEDKVDDHPEVLDV--AAVEAALSFCEENDDPQSLPGPWEHPIQQERDKPVPLPA---- 548

  Fly   608 QPPALT--------------------SAMAPAANVKLPGRQTNNSLSS---LTGNIFIPSGSAQQ 649
              |.:|                    ........:|:...:....:|.   :.|...:||....:
Mouse   549 --PEMTVKQERLDFEESENKGLHDLVDIRDSGVEIKVEPTEPEPGMSGAEIVAGVGPVPSMEPPE 611

  Fly   650 -QQQQSQEPPSSSSSSQSGTTTTASTVRSKKQKAVLNSSGSSSTSKMADKADRNLSKTETTGKSK 713
             :.|.|.|.|.||::...|                 .:.|||.   ..|:...:..|||.:.:|.
Mouse   612 LRSQDSDEEPRSSAAGDIG-----------------EADGSSG---KGDERPLSAVKTEASPESM 656

  Fly   714 KSAA-GSSASSSSSKAE-----RISGAYSDKSGDDHVNSSNRSTTNNNSSLNNNNNHKHAPHHSH 772
            .|.: ||:......:||     .:|.:..::||           |...|.:      |.||    
Mouse   657 LSPSHGSNLIEDPLEAETQHKFEMSDSLKEESG-----------TIFGSQI------KDAP---- 700

  Fly   773 NNNNNSHSTTTSATTTATTTTSQGYHYNSNLNHNQNHQNSHSHHTHHHHHHHHHTTNNHSNKHKT 837
            .::......:.:|:........||..|.|.:::......|....:.|               :.|
Mouse   701 GDDEEEDGVSEAASLEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIH---------------NAT 750

  Fly   838 KSHHSLAHNNNNNNSPTTNPTSTSLLHPVTTNNNSTYNSSNHANILSFTETEEVLQIG--MHKVL 900
            ...|:||      :|..::|.|:..                  ::.|  |.:|.:|..  ..|.:
Mouse   751 LQSHTLA------DSIPSSPASSQF------------------SVCS--EDQEAIQAQKIWKKAI 789

  Fly   901 VYV----KNHRDAWPFVDPVEEDIAPRYYSIIRRPMDLLKMEDKLDSGEYHKFSEFRNDFRLIVN 961
            :.|    .|||.|..|:.||.:||||.|:||::|||||..::..:::|.....:||:.|..|:..
Mouse   790 MLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQ 854

  Fly   962 NCRLYNGHNNEYTEMVNNLQ-DAFEK 986
            |..:||..:::...|...:| |..|:
Mouse   855 NAVMYNSSDHDVYHMAVEMQRDVLEQ 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dikarNP_001261480.1 WHIM1 100..148 CDD:292246
Bromo_gcn5_like 892..991 CDD:99941 34/102 (33%)
Brd8NP_001348065.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..273
Atrophin-1 <176..356 CDD:331285
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 520..547 8/26 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..745 38/201 (19%)
Bromo_brd8_like 782..885 CDD:99939 33/99 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 900..922
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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