DRSC/TRiP Functional Genomics Resources

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Protein Alignment dikar and nej

DIOPT Version :9

Sequence 1:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster
Sequence 2:NP_001188575.1 Gene:nej / 43856 FlyBaseID:FBgn0261617 Length:3282 Species:Drosophila melanogaster


Alignment Length:3065 Identity:610/3065 - (19%)
Similarity:912/3065 - (29%) Gaps:1142/3065 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 ATGGSASSSS---------GSGSGG-----AGASTGGASNSKGIGSNGTVWQVICFTEEDWQN-- 225
            |:||..::.|         |||:.|     ||...|||....| |:.|....    .|:||:.  
  Fly   894 ASGGQVAAGSSVLMPADTTGSGNAGNPNQNAGGVAGGAGGGNG-GNTGPPGD----NEKDWRESV 953

  Fly   226 ------------LAAKFKTS--TNAKERELFNILDDNFLPKLPQLFRERERLRRR--KLLQVRNS 274
                        :.|.|.||  |..:::.:.|::  ::..|:.:...|..:.|..  .||     
  Fly   954 TADLRNHLVHKLVQAIFPTSDPTTMQDKRMHNLV--SYAEKVEKDMYEMAKSRSEYYHLL----- 1011

  Fly   275 SRIRNIAELKARQEEERQRREREN---LYQDRQNAHWLAP------------------PQQQQQQ 318
              ...|.:::...||:|.:|:.::   |.|.:..|:.:|.                  |||||||
  Fly  1012 --AEKIYKIQKELEEKRLKRKEQHQQMLMQQQGVANPVAGGAAGGAGSAAGVAGGVVLPQQQQQQ 1074

  Fly   319 QQQQQQQQQQSQQRTRRRSQS---------------------TSTASGISTYASSLRRTTTTNSS 362
            |||||||.||..|.....|.|                     ..||:|:...........|..|.
  Fly  1075 QQQQQQQGQQPLQSCIHPSISPMGGVMPPQQLRPQGPPGILGQQTAAGLGVGVGVTNNMVTMRSH 1139

  Fly   363 EFLCHRETFCLSPENDEDDDDDDEALDAEQQSDQPEQQRQQEEQPPEEEQRQ--------EPEEL 419
                       ||..:.      .||..:|:...|:||:|   |||.....:        .|..:
  Fly  1140 -----------SPGGNM------LALQQQQRMQFPQQQQQ---QPPGSGAGKMLVGPPGPSPGGM 1184

  Fly   420 LAVSATDDDFRSPEAPKSQTPAELKSKSSHHHHHHHHKKKKSSKKQKKRHHRDKGRERDREHHHH 484
            : |:.....:::.....|..|.:.:.:...:.:.......:.|:..|:|              |.
  Fly  1185 V-VNPALSPYQTTNVLTSPVPGQQQQQQFINANGGTGANPQLSEIMKQR--------------HI 1234

  Fly   485 HRRRHKHASEADEGEDDNNNHNSNSNSNSNTNSISSNNSVQPKRRRSGQQQQHHQQAETTEPSTS 549
            |:::.:...:..:|.....:..|||.               |.:::..||||..||.:.|..|.|
  Fly  1235 HQQQQQQQQQQQQGMLLPQSPFSNST---------------PLQQQQQQQQQQQQQQQATSNSFS 1284

  Fly   550 LSPEDKENFCRQLQLLDTNSAAIAVATSIADLSLPSPVAHESETEQDEQVDQPAVVEAQPPALTS 614
                                               ||:..:.:.:|.:|....:|:...||..||
  Fly  1285 -----------------------------------SPMQQQQQGQQQQQQKPGSVLNNMPPTPTS 1314

  Fly   615 -------AMAP-----AANVKL------PG----------RQTNNSLSSLTGNIFIPSGSAQQQQ 651
                   |.||     |:||.:      ||          ...||:.||...|  .||.|:..||
  Fly  1315 LEALNAGAGAPGTGGSASNVTVSAPSPSPGFLSNGPSIGTPSNNNNNSSANNN--PPSVSSLMQQ 1377

  Fly   652 QQSQEP--------------------------------------------------PSSSSSSQS 666
            ..|..|                                                  .|:||||.:
  Fly  1378 PLSNRPGTPPYIPASPVPATSASGLAASSTPASAAATCASSGSGSNSSSGATAAGASSTSSSSSA 1442

  Fly   667 GTTTTASTVRSKKQKAVLNSS-----------GSSSTSKMAD--------KADRNLSKTETTGKS 712
            |:.|..|:|.:.....:..||           |.|||:..::        .|......|.||..|
  Fly  1443 GSGTPLSSVSTPTSATMATSSGGGGGGGGNAGGGSSTTPASNPLLLMSGGTAGGGTGATTTTSTS 1507

  Fly   713 KKSAAGSSASSSSSKAERISGAYSDKSGDDHVNSSNRSTTNNNSSLNN----------------N 761
            ..|...||:||.||:...:..|..|  .||...|.:...||.:....|                :
  Fly  1508 SSSRMMSSSSSLSSQMAALEAAARD--NDDETPSPSGENTNGSGGSGNAGGMASKGKLDSIKQDD 1570

  Fly   762 NNHKHAPHHSHNNNNNSHSTTTSATTTATTTTSQGYHYNSNLNHNQNHQNSHSHHTH-------- 818
            :..|.....|...||:|          :....|.|.....|:|::..........|.        
  Fly  1571 DIKKEFMDDSCGGNNDS----------SQMDCSTGGGKGKNVNNDGTSMIKMEIKTEDGLDGEVK 1625

  Fly   819 -------------HHHHHHHHTTNNHSNKHKTKSHHSLAHNNNNNNSPT-------TNPTSTSLL 863
                         .....||......|.....|.:.:.||:........       |.|.....|
  Fly  1626 IKTEAMDVDEAGGSTAGEHHGEGGGGSGVGGGKDNINGAHDGGATGGAVDIKPKTETKPLVPEPL 1690

  Fly   864 HPVTTNNNSTYNSSNHANILSFTETEEVLQIGMHKVL--VYVKNHRDAWPFVDPVEEDI--APRY 924
            .|         |:.:......|...|  |:..:...|  :| :...::.||..||:...  .|.|
  Fly  1691 AP---------NAGDKKKKCQFNPEE--LRTALLPTLEKLY-RQEPESVPFRYPVDPQALGIPDY 1743

  Fly   925 YSIIRRPMDLLKMEDKLDSGEYHKFSEFRNDFRLIVNNCRLYNGHNNEYTEMVNNLQDAFEKATK 989
            :.|:::||||..:...:.:|:|....|:.:|..|:.:|..|||...:........|.:.||    
  Fly  1744 FEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRKTSRVYRYCTKLSEVFE---- 1804

  Fly   990 KYFDNLSDDEDDDP---NLSYPAADSKMNVFREKYFSKKAKEETEKDAPGRPAVSSAEEDLSEIE 1051
                     .:.||   .|.|...       |:..|:.:             .:....:.|..|.
  Fly  1805 ---------AEIDPVMQALGYCCG-------RKYTFNPQ-------------VLCCYGKQLCTIP 1840

  Fly  1052 AEAPQKAQKRKRKEKDKRRKKKT---KSKADVETD-----DEDMEAEREPTPPPPPPTSKKSKTS 1108
            .:|...:.:...||......:.|   |...|::.|     |:.::                   |
  Fly  1841 RDAKYYSYQNSLKEYGVASNRYTYCQKCFNDIQGDTVTLGDDPLQ-------------------S 1886

  Fly  1109 KTGKEKEKDKEKEKDKDKEKDKETSSFKRGRKTKS----------------DKSASKSSKKTKKG 1157
            :|..:|::.||.:.| ..|.:...:..:.|||...                |....|.:.|.|:.
  Fly  1887 QTQIKKDQFKEMKND-HLELEPFVNCQECGRKQHQICVLWLDSIWPGGFVCDNCLKKKNSKRKEN 1950

  Fly  1158 AKKSSADSDPESDPSDSRESEDYSDDDHISLAKTKSLVKPTARTIAAQKKKSVPAESKVKMPTPV 1222
                                            |..:...||.:.             .|.:.|.|
  Fly  1951 --------------------------------KFNAKRLPTTKL-------------GVYIETRV 1970

  Fly  1223 KRQVKGKGKGGRKAKDDSLDSDQSDVNVKKQLPPTAAAALAESAAELEEDPDDPPPDEDEDEDSS 1287
            ...:|.|..|..:.....:.|....|.||    |.......|....:.|.|             .
  Fly  1971 NNFLKKKEAGAGEVHIRVVSSSDKCVEVK----PGMRRRFVEQGEMMNEFP-------------Y 2018

  Fly  1288 RSRSMSPF-KVD--------LH-KKYSKSALNDDLSELLTTVKKVPTAETTKLSARHQDEADEER 1342
            |::::..| :||        :| ::|.               .:.|...|.::...:.|.....|
  Fly  2019 RAKALFAFEEVDGIDVCFFGMHVQEYG---------------SECPAPNTRRVYIAYLDSVHFFR 2068

  Fly  1343 SSRESDGDF-----------KSLSNSRGSSEERPPVAKKG-----------KKAESSKKEKE--K 1383
            ..:.....:           |.|..:.......||  .:|           :|....|:.:|  |
  Fly  2069 PRQYRTAVYHEILLGYMDYVKQLGYTMAHIWACPP--SEGDDYIFHCHPTDQKIPKPKRLQEWYK 2131

  Fly  1384 KGRDKDR-DRDKEKDKDKSRSAKDKKSKDESPVLVAAAEAAAVVQAELDMLLPFMDKYDVIKYRR 1447
            |..||.. :|..:..||..:.|.:.|       |.:|||            ||:           
  Fly  2132 KMLDKGMIERIIQDYKDILKQAMEDK-------LGSAAE------------LPY----------- 2166

  Fly  1448 SRAAFSGSSASNSLAPSEDSKSAITKSNRENRKASAKREKSPDA-----VENK---RGRKSKDQK 1504
                |.|....|.|   |:|...:.:...|.||.:...|.:..|     .||:   .|:| |.||
  Fly  2167 ----FEGDFWPNVL---EESIKELDQEEEEKRKQAEAAEAAAAANLFSIEENEVSGDGKK-KGQK 2223

  Fly  1505 RSKESDKAEKSDKASKADTEKHSEKSKKKEE----PPKVVEKAQREKSPAPVSALETIKEPPAPT 1565
            ::|:|:|       |||...|:|:||.:.:.    ..|:....::.|....|..|.:.:...:..
  Fly  2224 KAKKSNK-------SKAAQRKNSKKSNEHQSGNDLSTKIYATMEKHKEVFFVIRLHSAQSAASLA 2281

  Fly  1566 PIATSASGKVKEGPAKKEPKKRPDKQMPPPPKPADKSSEKGSGKKSSSKKAAQKAGQPQTNNNTN 1630
            ||                       |.|.|....|..    .|:.:....|..|..:     .::
  Fly  2282 PI-----------------------QDPDPLLTCDLM----DGRDAFLTLARDKHFE-----FSS 2314

  Fly  1631 LEALDVETEQTLKDINRWLEHTPRFTEFSSASNS-----PSRYN--LLDDFD------------- 1675
            |......|...|.::     |.....:|....|.     .:||:  :.||||             
  Fly  2315 LRRAQFSTLSMLYEL-----HNQGQDKFVYTCNHCKTAVETRYHCTVCDDFDLCIVCKEKVGHQH 2374

  Fly  1676 --SGIGSKLDAADFRRPVALAAPKAELVPTKLAEALNELVSEPKEAVSKSES---ESVAPTPSSV 1735
              ..:|..:|...     |||..|.               :.|:||..:|..   :|:|......
  Fly  2375 KMEKLGFDIDDGS-----ALADHKQ---------------ANPQEARKQSIQRCIQSLAHACQCR 2419

  Fly  1736 SSSCGTPPHSMHSGNSIGSTSATAASSSNCSNNSMPTPLPVAVTPTPTPAPPPLLPIPKPKEPST 1800
            .::|..|        |..........:.||...                        |....|..
  Fly  2420 DANCRLP--------SCQKMKLVVQHTKNCKRK------------------------PNGGCPIC 2452

  Fly  1801 TQLIL------------NPPPP--PHIKQQLAKEAKRKSLKEKQAAQAAQAQQVKAKANVMRTID 1851
            .|||.            ..|.|  |:||.:         ||::|:.|..|.||      ::|...
  Fly  2453 KQLIALCCYHAKNCEEQKCPVPFCPNIKHK---------LKQQQSQQKFQQQQ------LLRRRV 2502

  Fly  1852 RLQPGKAKGNLLQNVVAVK--STEEGGDSHAGVNPVTTKVKELK-NALITETCEGAPKLSLGTVL 1913
            .|....|....||...||.  :...||....|::.|....:.:. .|.|..  .||..:|..||.
  Fly  2503 ALMSRTAAPAALQGPAAVSGPTVVSGGVPVVGMSGVAVSQQVIPGQAGILP--PGAGGMSPSTVA 2565

  Fly  1914 KTQDFSLGKSLEEMSGKKDANEDDRPNEEASPKNSSPPTTPNTEAP----KPFEALHELSKRGKS 1974
            .....|.|.....|.|.                     |:|:...|    ||          |..
  Fly  2566 VPSPVSGGAGAGGMGGM---------------------TSPHPHQPGIGMKP----------GGG 2599

  Fly  1975 SEPSKSEASQKEKPNLSAWLKAFGGPKVSKKSEDEEKQQTPVQDLQGDSKVAPPAHSPAGDNFSL 2039
            ..||         ||:.         :|.|:.::|..:| .|....|..|..|.|          
  Fly  2600 HSPS---------PNVL---------QVVKQVQEEAARQ-QVSHGGGFGKGVPMA---------- 2635

  Fly  2040 PTVMRQRKPSTGSTNSERSSFSQDPDSPRIAIDERYGSYAAGSYTSPIGASPIGASPIMVSPKPN 2104
            |.||  .:|..|:             .|...:..:.|....|  ...:|...:|           
  Fly  2636 PPVM--NRPMGGA-------------GPNQNVVNQLGGMGVG--VGGVGGVGVG----------- 2672

  Fly  2105 DDMGKPASPYPLNGAIKVGFYQ-DTTTKSSPDKSCSPREMNSPYPQYSQHIYSSASSPNVSTPDM 2168
                         |...||..| ::...::|....|...||      ..|:.|.         |.
  Fly  2673 -------------GVGGVGVNQLNSGGGNTPGAPISGPGMN------VNHLMSM---------DQ 2709

  Fly  2169 SGTSPYGGGNSYNPSGSEASKTPAYSSTSPLPIYDQYKQPRSQESDYNSSMSPSTPNPHSPYQQP 2233
            .|....|||.: ||.|.                                       ||.:.|.. 
  Fly  2710 WGGGGAGGGGA-NPGGG---------------------------------------NPQARYAN- 2733

  Fly  2234 QSSPYTTPQQSQSTHPSPYHNQSPYHQQQHSPYHPPAAQQQQQSSQPSHSPAAHQQALSPMHSVE 2298
                 .|....|.||            ...:...||  |||||.                |..:.
  Fly  2734 -----NTGGMRQPTH------------VMQTNLIPP--QQQQQM----------------MGGLG 2763

  Fly  2299 SPASSAATQPPTPLAQSPAEQQHSPYQQPVLSPYQQPQQQVQPPV---VPPVQPSAGAQASTALG 2360
            .|.....       .|.|...||......:.:          ||:   |..|:||.||      |
  Fly  2764 GPNQLGG-------GQMPVGGQHGGMGMGMGA----------PPMAGTVGGVRPSPGA------G 2805

  Fly  2361 NNGYAPTHDSYQQLQQQQRSLYNPATLINPLSTAASSTASITKPNNDWSLNRSLLPPSITNTVNQ 2425
            ..|.:.|...   |..||.:|.......||.:.:.....:|.|.|           |.|...:.:
  Fly  2806 GGGGSATGGG---LNTQQLALIMQKIKNNPTNESNQHILAILKQN-----------PQIMAAIIK 2856

  Fly  2426 AAQQQQQQ--------------QQQQAGQLQQQPQMQAAQQQLQSTPQQQQQQLQGTPQQQQLQG 2476
            ..||.|..              ||||||...|.||.           ||||||.|...||||:|.
  Fly  2857 QRQQSQNNAAAGGGAPGPGGALQQQQAGNGPQNPQQ-----------QQQQQQQQQVMQQQQMQH 2910

  Fly  2477 SQQQQQQQQQQQQLQTSQQQQQQVLGHQQQHKPKYPTYAQYQSTNAAANAAAAADAVDNLQQQQQ 2541
            ...|||.....||:..:||||||.:                                 ||.||||
  Fly  2911 MMNQQQGGGGPQQMNPNQQQQQQQV---------------------------------NLMQQQQ 2942

  Fly  2542 KIAPPTYGSDMATFMQH------QMQQPPKTDTLINPLKRPG--EEIGM--DYSGNAANKMQKRE 2596
            :..|...||.:.|.|.:      .:|..|       |...||  .:.||  :.:.|....||..:
  Fly  2943 QGGPGGPGSGLPTRMPNMPNALGMLQSLP-------PNMSPGVSTQGGMVPNQNWNKMRYMQMSQ 3000

  Fly  2597 ETPAQQQQQQ------------QQQQP-----TQNQTQSLLNKQQQMFNS--------FLGTMAF 2636
            ..|...|:|:            |||.|     ..|            ||:        .:|....
  Fly  3001 YPPPYPQRQRGPHMGGAGPGPGQQQFPGGGGGAGN------------FNAGGAGGAGGVVGVGGV 3053

  Fly  2637 GKPIGNIAPDKAFEMYNRAAAMGFPKDFAKDNSCQLQQ----------------QQQQQQSPQVT 2685
            ....|.:.....:.|.|.|||         .|..|.||                |||||....:.
  Fly  3054 PGGAGTVPGGDQYSMANAAAA---------SNMLQQQQGQVGVGVGVGVKPGPGQQQQQMGVGMP 3109

  Fly  2686 TNKQQANQQTQQQPQQQSQQSQPHLTQLQTALSQNYQQQQQQTQAQKLPQQQQQQPPQQLNYQQQ 2750
            ...||  ||.||||.||.|..|   ..:..|.:||      .:.....|..|...||...:.|||
  Fly  3110 PGMQQ--QQQQQQPLQQQQMMQ---VAMPNANAQN------PSAVVGGPNAQVMGPPTPHSLQQQ 3163

  Fly  2751 --QAQLNHNYTAQQQATAVPDKPPAAQSTVAAA--VSESSSNMMNLPSTAHQ--HHLSQTHHLAA 2809
              |:..:.......|.|..|...|:.::..:|:  ...|..::|:..|.|.|  .|....:|...
  Fly  3164 LMQSARSSPPIRSPQPTPSPRSAPSPRAAPSASPRAQPSPHHVMSSHSPAPQGPPHDGMHNHGMH 3228

  Fly  2810 YNKPTPPPPQ 2819
            :..|.|..||
  Fly  3229 HQSPLPGVPQ 3238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dikarNP_001261480.1 WHIM1 100..148 CDD:292246
Bromo_gcn5_like 892..991 CDD:99941 26/102 (25%)
nejNP_001188575.1 ZnF_TAZ 530..600 CDD:214717
KIX 946..1024 CDD:280354 15/86 (17%)
Bromo_cbp_like 1705..1812 CDD:99927 29/122 (24%)
RING_CBP-p300 1824..1906 CDD:276805 18/114 (16%)
PHD_CBP_p300 1908..1939 CDD:277032 4/30 (13%)
HAT_KAT11 1970..2283 CDD:285432 77/391 (20%)
ZZ_CBP 2339..2379 CDD:239077 7/39 (18%)
ZnF_TAZ 2404..2476 CDD:214717 15/103 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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