DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dikar and Baz1b

DIOPT Version :9

Sequence 1:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster
Sequence 2:NP_001178845.1 Gene:Baz1b / 368002 RGDID:1597089 Length:1476 Species:Rattus norvegicus


Alignment Length:1587 Identity:289/1587 - (18%)
Similarity:492/1587 - (31%) Gaps:567/1587 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 CLSPENDEDDDDDDEALDAEQQSDQPEQQRQQEEQPPEEEQRQEPEELLAVSATDDDFRSP-EAP 435
            |.||.:|:::            |.|..|..|:|....|:..|:|       |..|...||| :.|
  Rat   156 CDSPSSDKEN------------SSQMAQDHQKETVVKEDGGRRE-------SINDRARRSPRKLP 201

  Fly   436 KSQTPAELKSKSSHHHHHHHHKKKKSSKKQKKRHHRDKGRERDREHHHHHRR---RHKHASEADE 497
            .|....|.|........|.:..|.:|..|.......|.....:|..:....|   || :|..|..
  Rat   202 TSLKKGERKWAPPKFLPHKYDVKLQSEDKIISNVPADSLIRTERPPNKEILRYFIRH-NALRAGT 265

  Fly   498 GE-------------------------DDNNNHNSN-SNSNSNTNSISSNNSVQPKRRRSGQQQQ 536
            ||                         |.......| |....||.|.....|.:|||        
  Rat   266 GENAPWVVEDELVKKYSLPSKFSDFLLDPYKYMTLNPSTKRKNTGSPDRKPSKKPKR-------- 322

  Fly   537 HHQQAETTEPSTSLSPEDKENFCRQLQLLDTNSAAIAVATSIADLSLPSPVAHESETEQDEQVDQ 601
                    :.|:..||.:.:.:|........|...:.|..|   .:..||..|..|         
  Rat   323 --------DNSSLSSPLNPKLWCHVHLEKSLNGPPLKVKNS---KNSKSPEEHLEE--------- 367

  Fly   602 PAVVEAQPP-ALTSAMAP--AANVKLPGRQTNNSLSSLTGNIFIPSGSAQQQQQQSQEPPSSSSS 663
              |::...| .|.|...|  ..:.|.||:.::..|.:                            
  Rat   368 --VMKIMSPNKLHSFHIPKKGPSTKKPGKHSDKPLKA---------------------------- 402

  Fly   664 SQSGTTTTASTVRSKKQKAVLNSSGSSSTSKMADKADRNLSKTETTGKSKKSAAGSSASSSS--S 726
                         ..:.|.:||...|:..||...|.    .||..| |.|:......|..:.  :
  Rat   403 -------------KGRGKGILNGQKSTGNSKSPSKC----VKTPKT-KMKQMTLLDMAKGTQKMT 449

  Fly   727 KAERISGAYSDKSGDDHVNSSNRSTTNNNSSLNNNNNHKHAP--------HHSHNNNNNSHSTTT 783
            :..|.||.....||                     ..|||.|        ::..|.:.....:..
  Rat   450 RTPRSSGGVPRSSG---------------------KPHKHLPPAALHLIAYYKENKDKEDKKSAL 493

  Fly   784 SA--TTTATTTTSQG---------------YHYNSNLNHNQNHQN-SHSHHTHHHHHHHHHTTNN 830
            |.  :.||...:|:.               |..   |.|.:...: |......:...........
  Rat   494 SCVISKTARLLSSEDRARLPEELRALVQKRYEL---LEHKKRWASMSEEQRKEYLKKKRQELKER 555

  Fly   831 HSNKHKTKSHHSLA-----------HNNNNNNSPTTNPTST-----------------------S 861
            ...|.|.:....:.           ......|.||.....|                       .
  Rat   556 LREKAKERREKEMLERLEKQKRYEDQELGGRNLPTFRLVDTPEGLPNTLFGDVALVVEFLSCYSG 620

  Fly   862 LL-----HPVTTNNNSTYNSSNHANILSFTETEEVLQIGMHKVLVYVKNHRDAWPFVDPVEEDIA 921
            ||     :|:|..:.....|::..   .|.....||.|.:..:|            .|.:.||..
  Rat   621 LLLPDAQYPITAVSLMEALSADKG---GFLYLNRVLVILLQTLL------------QDEIAEDYG 670

  Fly   922 PRYYSIIRRPMDLLKMEDKLDSGEYHKFSEFRNDFRLIVNNCRLY-------NGHNNEYTEMVNN 979
            .....:...|:.|            |..||.   .||.:..|.:.       ...|.:.|...:|
  Rat   671 ELGMKLSEIPLTL------------HSVSEL---VRLCLRRCDVQEDSEGSDTDDNKDSTPFEDN 720

  Fly   980 -LQDAF-EKATKKYFDNLSDDEDDDPNLSYPAADSKMNVFRE------KYFSKKAKEETEKDAPG 1036
             :||.| ||.....|..|:.:|             |:.:...      ..:|.:...||.:.   
  Rat   721 EVQDEFLEKLETSEFFELTSEE-------------KLRILTALCHRILMTYSVQDHMETRQQ--- 769

  Fly  1037 RPAVSSAE---EDLSEIEAEAPQK-AQKRKRKEKDKRRKK------------------KTKSKAD 1079
                .|||   |.|:.::.|..:| |:|:||||.:.|.|:                  |.:::.:
  Rat   770 ----MSAELWKERLAVLKEENDKKRAEKQKRKEMEARNKENGKEENVLGKVDRKKEIVKIENQVE 830

  Fly  1080 VETDDE----------DMEAEREPTPPPPPPTSKKSKTSKTGKEKEKDKEKEKDKDKEKDKETSS 1134
            ||.||.          .|:|:|:        ...:.:.:|...|:|.::|:.:   |.|.....:
  Rat   831 VEADDMISAVKSRRLLSMQAKRK--------REIQERETKVRLEREAEEERVR---KHKAAAEKA 884

  Fly  1135 FKRG--------RKTK--SDKSASK----SSKK----TKKGAKKSSADSDPESDPSDSRESEDYS 1181
            |:.|        |:|.  :|::.::    |::.    .:||...:|.|...:....|   ..:..
  Rat   885 FQEGIAKAKLVLRRTPIGTDRNHNRYWLFSNEVPGLFIEKGWVHNSIDYRFKHHRKD---HNNLP 946

  Fly  1182 DDDHISLAKTKSLVKPTARTIAAQKKKSVPAESKVKMPTPVKRQVKGKGKGGRKAKDDSLDSDQS 1246
            |||:...:|..:|                                 ||..........:|::.::
  Rat   947 DDDYCPRSKKANL---------------------------------GKNASVNAHLGSALEAVET 978

  Fly  1247 DVNVKKQLPPTAAAALAESAAELEEDPDDPPPDEDEDEDSSRSRSMSPFKVDLHKKYSK------ 1305
            .|..:.|    ....|.:|..||:|..:...|....:         |..|..|.|:|.:      
  Rat   979 TVPKQGQ----NLWFLCDSQKELDELLNCLHPQGIRE---------SQLKERLEKRYQEITHSIH 1030

  Fly  1306 -------------------SALNDDLSELLTTVKK--VPTAETTKLSARHQDEADEERSSRESDG 1349
                               :.|..||.|:.|.::|  :...|.|       .|.:....|.|...
  Rat  1031 LARKPNLGLKSCDGNQELLNFLRSDLIEVATRLQKGGLGYMEGT-------SEFEARVISLEKLK 1088

  Fly  1350 DFKSLSNSRGSSEERPPVAKKGKKAESSKKEKEKKGRDKDRDRDKEKDKDKSRSAKDKKSKDESP 1414
            ||.....:..:|     |.||..:...:.|:|::|.:.:|..:.:|.|       ::||..:|:.
  Rat  1089 DFGECVIALQAS-----VIKKFLQGFMAPKQKKRKLQSEDSTKSEEVD-------EEKKMVEEAK 1141

  Fly  1415 VLVAAAE-AAAVVQAE----LDMLLPFMD---KYDVIKYRRSRAAFSGSSASNSLA-----PSED 1466
            |..|..: ..|:.:|:    :.:||..:|   |:|:             ||.|:..     ..||
  Rat  1142 VASALEKWKTAIREAQTFSRMHVLLGMLDACIKWDM-------------SAENARCKVCRKKGED 1193

  Fly  1467 SKSAITKSNRENRKA-------SAKRE-----------KSPDAVENKRGRKSKDQKRSKESDKAE 1513
            .|..:..   |..||       .|..|           :.|.|..|.|||...::..|::|:..|
  Rat  1194 DKLILCD---ECNKAFHLFCLRPALYEVPDGEWQCPACQPPTARRNSRGRNYTEESTSEDSEGDE 1255

  Fly  1514 KSDKASKADTEKHSEKSKKKEEPPKVVEKAQREKSPAPVSALETIKEPPAPTPIATSASGKVKEG 1578
            ..|:      |:..|:.:::||..:|.....|.:        :||:                  |
  Rat  1256 SGDE------EEEEEEEEEEEEDYEVAGLRLRPR--------KTIR------------------G 1288

  Fly  1579 PAKKEPKKRPDKQMPPPPKPADKSSEKGSGKKSSSKKAAQKAGQP-------QTNNNTNLEALDV 1636
            .....|..||.:    ||           ||||.:.:.::.....       ||..::..::|::
  Rat  1289 KQSVIPAARPGR----PP-----------GKKSHAARRSRPKDDTEVDELVLQTKRSSRRQSLEL 1338

  Fly  1637 E-TEQTLKDINRWLEHTPRFTEFSSASNSPSRYNLLD---DFDSGIGSKLDAADFRRPVALAAPK 1697
            : .|:.|..:.::....| |.|..:...:...|:::|   ||.: :.:|....::|         
  Rat  1339 QKCEEILHKLVKYRFSWP-FREPVTRDEAEDYYDVIDHPMDFQT-MQNKCSCGNYR--------- 1392

  Fly  1698 AELVPTKLAEALNELVSEPKEAVSKSE 1724
                      ::.|.:::.|:..:.:|
  Rat  1393 ----------SVQEFLTDVKQVFANAE 1409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dikarNP_001261480.1 WHIM1 100..148 CDD:292246
Bromo_gcn5_like 892..991 CDD:99941 22/107 (21%)
Baz1bNP_001178845.1 WAC_Acf1_DNA_bd 21..120 CDD:287503
DDT 602..666 CDD:214726 11/78 (14%)
WHIM1 722..771 CDD:292246 12/68 (18%)
WHIM2 897..925 CDD:292247 4/27 (15%)
WHIM3 988..1026 CDD:292248 11/46 (24%)
PHD_BAZ1B 1183..1228 CDD:277098 8/47 (17%)
Bromo_WSTF_like 1337..1433 CDD:99937 14/94 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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