DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dikar and baz-2

DIOPT Version :9

Sequence 1:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster
Sequence 2:NP_498673.3 Gene:baz-2 / 176078 WormBaseID:WBGene00001470 Length:1390 Species:Caenorhabditis elegans


Alignment Length:455 Identity:109/455 - (23%)
Similarity:154/455 - (33%) Gaps:129/455 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  2667 DNS--------CQLQQQQQQQQSPQVTTNKQQANQQTQQQPQQQSQQSQPHLTQLQTALSQNYQQ 2723
            |||        ...|||||||...|.....|:|   |...|.:.:..:... |....:.|.....
 Worm     3 DNSSNQFLLLLAAAQQQQQQQLLQQQLAKIQKA---TASSPSKSTNGTSAS-TSAVPSTSGTSSS 63

  Fly  2724 QQQQTQAQKLPQQQQQQPPQQLNYQQQQAQLNHNYTAQ--QQATAVPD----------KPPAAQS 2776
            |.:..|.|.|.:.||         .||.||......||  ||..|..|          |..||.:
 Worm    64 QNEAAQLQNLAKMQQ---------IQQLAQFGALMAAQKKQQEKAAADKAKEKEKEKQKAAAAAA 119

  Fly  2777 TVAAAVSESSSNMMNLPSTAHQHHLS--QTHHLAAYNKPTPPPPQTYSNPLMQSMLGYAGNYFDK 2839
            ..||..|.|:|:...:|..:.:...:  |...:.|..:....|.::.....::.|:..|     |
 Worm   120 AAAAKASASTSSASAIPGLSPEMLAAWQQAIQMQALQQMMMTPQKSQMEEAIKKMMDMA-----K 179

  Fly  2840 TMPPAAHMYSASSSAASAYGNPAQQLPGNYVPGNNNPAHQQQQQPQQQQQQQQQAPAVPPAEVKA 2904
            ..|...    ||:|:||...:.......:....|||.|:............|             
 Worm   180 KKPAGV----ASTSSASTSSSTPSTSSASITSSNNNAANNAASNMMNNVMWQ------------- 227

  Fly  2905 PAKRGRKKKAATIAAEAAAAAAKQQQQQQQQQQ------QQAQQQQQVAAQQQHQQQQVSAQQQQ 2963
                              ..||:.||:|||||:      .||::.:::|.||| ::|.|..:||:
 Worm   228 ------------------LVAAQMQQKQQQQQKDTQKKADQAKKAKELAKQQQ-KEQDVKNKQQE 273

  Fly  2964 QQHQQVAAQQQQHQAMPQYNMPQSMASAAAATNNQLQAHAQALQQGFQLYAGLKSGGVSSPVGSS 3028
            :..:.:.|   |||...|....:..|.|||.....|.||..||:.             .||    
 Worm   274 EILKFLMA---QHQLNHQKKHEKKQADAAALAAKVLAAHRAALES-------------DSP---- 318

  Fly  3029 AATPVNSGGSTTN--------------QTAADAAAISLKTSTGGMVPGSAFNFAPTPGTLGLYGD 3079
                  ..|..||              ||...:.|     |.|  |.|....|||....|..|.:
 Worm   319 ------EEGKKTNEAMLRLPLQLGWRRQTCVRSIA-----SAG--VKGDVSYFAPCGKKLSTYSE 370

  Fly  3080  3079
             Worm   371  370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dikarNP_001261480.1 WHIM1 100..148 CDD:292246
Bromo_gcn5_like 892..991 CDD:99941
baz-2NP_498673.3 FlgD 35..88 CDD:281896 15/65 (23%)
HAT_MBD 328..401 CDD:238691 12/50 (24%)
DDT 524..>564 CDD:295426
WHIM1 622..670 CDD:292246
WHIM3 899..931 CDD:292248
PHD_BAZ2A_like 1102..1146 CDD:277020
PHD 1155..1199 CDD:214584
Bromo_BAZ2A_B_like 1278..1374 CDD:99935
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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