DRSC/TRiP Functional Genomics Resources

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Protein Alignment dikar and sepa-1

DIOPT Version :9

Sequence 1:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster
Sequence 2:NP_493339.1 Gene:sepa-1 / 173196 WormBaseID:WBGene00010808 Length:702 Species:Caenorhabditis elegans


Alignment Length:466 Identity:91/466 - (19%)
Similarity:158/466 - (33%) Gaps:145/466 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1122 KDKDKEKDKETSSFKRGRKTKSDKSASKS------SKKTKKGAKKSSADSDPESDPSDSRESEDY 1180
            :.:|....||||.  .|...|....|.|:      ..||:...||:|.:......|..: |.||.
 Worm   336 RGRDGRLQKETSG--SGGFEKMQPVAVKTFQVQWVEMKTEFEKKKASTERVEPQHPVQT-EGEDI 397

  Fly  1181 SDDDHISLAKTKSLVKPTARTIAAQKKKSVPAESKVKMPTPVKRQVKGKGKGGRKAKDDSLDSDQ 1245
            .:   ..||..:|......:.:...:.:.:|                      |||  ..::|.:
 Worm   398 ME---TVLAMVESFNCDLRKELGLTQDQEIP----------------------RKA--PRVESAE 435

  Fly  1246 SDVNVKKQLPPTAAAALAESAAELEEDPDDPPPDEDEDEDSSRSRSMSPFKVDLHKKYSKSALND 1310
            ::.|:.|.|          ...::.:||::|.....|..::                |....|:|
 Worm   436 TEENIVKNL----------EKLQIAKDPEEPTTAASEGGNT----------------YGYQELDD 474

  Fly  1311 DLSELLTTVKKVPTAETTKLSARHQDEADEERSSRESDGDFKSLSNSRGSSEERPPVAKKGKKAE 1375
            .:||.|  ::|       :..::|||..:.|        ..|:::       ..|.||...||  
 Worm   475 TMSEGL--LEK-------EAESKHQDANEPE--------PVKNVT-------YEPDVAAMDKK-- 513

  Fly  1376 SSKKEKEKKGR-----------DKDR-DRDKEKDKDKSRSAKDKKSKDESPVLVAAAEAAAVVQA 1428
              ||.:|.|.|           :|.| :|..:|....|....::.::.|:|...|.||....:..
 Worm   514 --KKRRELKSRLNKINAQIDELEKRRMERAGKKQVVSSSVPSEEAAQVEAPASPALAENTNQISN 576

  Fly  1429 ELDMLLPFMDKYDVIKYRRSRAAFSGSSASNSLAPSEDSKSAITKSNRENR-----KASAKREKS 1488
            |      ...|.|:         |.|.:.| .|..:..||..|.:..|.:.     ||...|.::
 Worm   577 E------ETPKIDI---------FEGYNGS-FLFGTNTSKEWIVEDIRNHMVGKLLKAFWPRIQN 625

  Fly  1489 PDAVENKRGRKSKDQKRSKESDKAEKSD----------------------KASKADTEKHSEKSK 1531
            .:.:..:..:|.....|..|::..|.|:                      |..:|....|.:.::
 Worm   626 VEEMNGELFKKLIANARKCETEILEASNDRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQPTQ 690

  Fly  1532 KKEEPPKVVEK 1542
            ..:|..|..||
 Worm   691 SSDELAKNHEK 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dikarNP_001261480.1 WHIM1 100..148 CDD:292246
Bromo_gcn5_like 892..991 CDD:99941
sepa-1NP_493339.1 KIX 600..676 CDD:280354 11/75 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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