DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dikar and baz1a

DIOPT Version :9

Sequence 1:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster
Sequence 2:XP_004917293.2 Gene:baz1a / 100497377 XenbaseID:XB-GENE-986582 Length:1587 Species:Xenopus tropicalis


Alignment Length:1465 Identity:282/1465 - (19%)
Similarity:475/1465 - (32%) Gaps:511/1465 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   917 EEDIAPRYY--SIIRRP--MDLLKMEDKLDSGEYHKFSEFRNDFRLIVNN------CRLY----- 966
            |..|.|..|  :::||.  .||.:     :...|.|...|.::...:|.|      |::.     
 Frog    97 ESLIVPILYLSTLVRRQRVTDLCE-----EIFAYVKDRFFVDETVTVVRNSGARLECKILEVKLP 156

  Fly   967 -------NGH-NNEYTEMVNNLQDAFEKATKKYFDNLSDDEDDDPNLS-----------YPAA-- 1010
                   ||| :||.|.:::   |:.|:..|:........|..:|:|.           |.:.  
 Frog   157 PQQNGVANGHVSNEDTIVIS---DSDEEPPKEMPQTRKKKEPTNPSLCKYKVKPIQKELYESVTV 218

  Fly  1011 -----DSKMNVF---REKYFSK---KAKEETEKDAPG---------RPAVSSAEEDLSEIEAEAP 1055
                 ..|.::|   |.|.|.|   :|.|...|..|.         |..::...|:..:.:...|
 Frog   219 KGSQLSRKPSLFSQDRLKLFLKLHCEAHEGIIKTKPSSVTKYQVSVRNFLNYFPEEPPDFQRSPP 283

  Fly  1056 QK------------------AQKRKR----KEKDKRRKKKTKSKADVETDDEDMEAEREPTPPPP 1098
            .|                  |.|:|:    ||:::..::|.:.|| :|.:...|..||       
 Frog   284 NKKISGRPLPNKHLNRGNGLANKQKQIQAAKERERILQQKKQLKA-MEMEKARMRRER------- 340

  Fly  1099 PPTSKKSK-TSKTGKEKEKDKEK---EKDKDKEKDKETSSFKRGRKTKSDKSASKSSKKTKKGAK 1159
             ....:|: ..|..||::|::.|   |.::.|:|::     |...|.:.:|...|..::.||.|:
 Frog   341 -AVDARSRIQEKHIKERQKEELKKIVEVERLKKKEE-----KERMKLEKEKEREKLREEKKKYAE 399

  Fly  1160 KSSADSDPESDPSDSRESEDYSDDDHISLAKTKSLVKPTARTIAAQKKKSVPAESKVKMPTPVKR 1224
            :..    ..|.|.|..|.:|.                           |.:|.      |||||.
 Frog   400 RLK----QWSRPRDDMECDDL---------------------------KELPE------PTPVKT 427

  Fly  1225 QVKGKGKGGRKAKDDSLDSDQSDVNVKKQLPPTAA-------------------------AALAE 1264
            ::..:..|......:.|.:.....::|.:.|....                         :|:.:
 Frog   428 RLPPESFGDAIMVLEFLHAFGDLFDLKDEFPDGMTFEMLEEALVGSDPEGPLCELLFFFMSAIFQ 492

  Fly  1265 SAAELEE----------DPDDPPPDEDEDEDSSRS-----RSMSPFKVDLHK------------- 1301
            :.||.||          :|.|.....|||.|.::|     .:::.....||:             
 Frog   493 AVAEEEEEVEKEQVKETEPKDLAEALDEDADPTKSALTAVATLAAAWPQLHQGCRLKNLDLDSCT 557

  Fly  1302 -----------------------KYSK----SALNDDLSEL----------LTTVKKVPTAETTK 1329
                                   :|.|    .|.:|...||          |:||.........|
 Frog   558 LSEILRLHILASGADATFANAKYRYQKQGGFDATDDACVELRLSHPAILKKLSTVSVYALQPGEK 622

  Fly  1330 LSARH----------------QDEADEERSSRESDGDFKSLSNSRGSSEERPPVAKKGKKAESSK 1378
            |...|                :|..:|.|.:::   :|:.|...:...|.....|:..|:.|...
 Frog   623 LKILHALCGKLLTLVSTRDYIEDYVEELRQAKQ---EFRELKAEQNRREREEAAARIRKRKEDKL 684

  Fly  1379 KEKEKKGRDKDRDRDKEKDKDKSRSAKDKKSKDESPVLVAAAEAAAVVQAELDMLLPFMDKYDVI 1443
            ||:|.|.:||   :|:.||::....:||..:::               |.|||            
 Frog   685 KEQEMKMKDK---QDRIKDEENKGFSKDTGNEE---------------QDELD------------ 719

  Fly  1444 KYRRSRAAFSGSSASNSLAPSEDSKSAITKSNRENRKASAKREKSPDAVENKRGRKSKDQKRSKE 1508
                       :|:.|..|...|..||  ..:.::.:.:.::.|   .::.:||.|....:....
 Frog   720 -----------TSSENKDAEQRDQDSA--SDDEDDARPTGRKGK---GIKGQRGFKDGKNRNGNF 768

  Fly  1509 SDKAEKSDKASKADTEKHSEKSKKKEEPPKVVEKAQREKS------------------------- 1548
            ....||.:..:..:.|:..::..|:|:  ::|||.|:..:                         
 Frog   769 DGGLEKKEVLTAEEEEQLRQEYLKREQ--ELVEKIQQATACTNIFPLGRDRWYRRFWTFFSVPGL 831

  Fly  1549 ---------------PAPVSALETIKEPPAPTPIATSASGKVKEGPAKKEPKKRPDKQMPPPPKP 1598
                           |.|.|..:|      |....|..:|......:.:|.||..|     .|||
 Frog   832 FLEEDYSNLTEDLLQPQPFSKQDT------PHKDLTVVNGHESSTSSPQEDKKETD-----TPKP 885

  Fly  1599 ADKSSEKGSGKKSSSKKAAQKAGQPQTNNNTNLEALDV--ETEQTLKDINRWLEHTPRFTEFSSA 1661
            .::.:.   ....||.:...|.          :|||:.  ..|..|||         ..|:..|.
 Frog   886 VNRPNR---WCYYSSIEQLDKL----------IEALNTRGHRESALKD---------TLTQEKSK 928

  Fly  1662 ------SNSPSRYNLLD------DFDSGIGSKLDAADFRRPV----------------------- 1691
                  |.|.:|:::.|      ||....|..|:|:: ..||                       
 Frog   929 ICQRLDSFSVNRFHIADNTLPTLDFKPARGKSLNASE-SSPVSAEKQLELRLCDLILDIEDRIYQ 992

  Fly  1692 ----ALAAPKAELVPTKLAEALNELVS-EPKE-AVSKSESESVAPTPSSVSSSCGTPPHSMHSGN 1750
                |:..|..:|....|.:...||:: |.|| ..||..:..:....:.:..|.        ...
 Frog   993 GTLGAIKVPDRQLWRAALEKNTYELLNDEAKENGSSKPMNHGIEEMENDIKQSA--------KER 1049

  Fly  1751 SIGSTSATAASSSNCSNNSMPTPLPVAVTPTPTPAPPPLLPIPKPKEPSTTQLILNPP--PPPHI 1813
            .:|..:.|.:::|..:|.  |.|:..||.....    .||.|    |....:..|..|  .....
 Frog  1050 LLGLKNDTPSATSTSTNT--PQPMNNAVRYLAR----ALLQI----EQGVERKYLKAPLGDAEDT 1104

  Fly  1814 KQQLAKEAKRK-SLKEKQAAQAAQAQQVKAKANVMRTI-DRLQPGKAKGNLLQNVVAVKSTEEGG 1876
            |:....:.|:| ..|:|...|.::...|.....|.||: ||.:...........:....||.:..
 Frog  1105 KKDTKSDKKKKDDKKKKDEDQNSEKDDVSESGRVQRTVLDRWRESLLSSGSFSQIFLHLSTLDRS 1169

  Fly  1877 D--SHAGVN---PVTTKVKELKNALITETC------------------------EGAPKLSLGTV 1912
            .  |.:.:|   .|..|..:.::.::.:.|                        |..||.....:
 Frog  1170 ILWSRSILNARCKVCRKKGDGESMVLCDGCDRGHHIYCVRPKLKYVPEGDWFCPECHPKQRSRRL 1234

  Fly  1913 LKTQDFSLGKSLEEMSGKKDANEDDRPNEEASPKNSSPPTTPNTEAPKPFEALHELSKRGKSSEP 1977
            ...|.:|:....||....:|..|::...||...:.|.   :.|.|.    |.:.|     :.|.|
 Frog  1235 PSRQRYSMDSDEEEEEELEDQEEEEEEEEEEEQEESE---SENEEE----EVMSE-----EESPP 1287

  Fly  1978 SKSEASQKEKPNLSAWLKAFGGPKVSKKSEDEE--KQQTPVQDLQGDSKVAPPAHSPAGDNFSLP 2040
            .:....:.:.|     ||..||....|......  ||.||        |..|||...:|      
 Frog  1288 KRGRPPRVQLP-----LKMRGGKAAGKPGPKPRTGKQSTP--------KNTPPAQKGSG------ 1333

  Fly  2041 TVMRQRK----PSTGSTNSERSSFSQDPDSPRIAI 2071
               |.||    ||...| |..|:|    |||..|:
 Frog  1334 ---RGRKTRSAPSLEPT-SRLSAF----DSPAYAV 1360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dikarNP_001261480.1 WHIM1 100..148 CDD:292246
Bromo_gcn5_like 892..991 CDD:99941 23/96 (24%)
baz1aXP_004917293.2 WAC_Acf1_DNA_bd 37..136 CDD:402251 11/43 (26%)
DDT 431..491 CDD:214726 5/59 (8%)
WHIM1 599..644 CDD:406127 6/44 (14%)
PTZ00121 <648..803 CDD:173412 41/205 (20%)
WSD 808..926 CDD:406128 25/150 (17%)
PHD_BAZ1A 1180..1225 CDD:277097 3/44 (7%)
Bromo_Acf1_like 1455..1569 CDD:99936
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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