DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ple and th2

DIOPT Version :9

Sequence 1:NP_001286955.1 Gene:ple / 38746 FlyBaseID:FBgn0005626 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_005164791.1 Gene:th2 / 414844 ZFINID:ZDB-GENE-050201-1 Length:473 Species:Danio rerio


Alignment Length:406 Identity:220/406 - (54%)
Similarity:300/406 - (73%) Gaps:16/406 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 KAIETFHGTVQHVESRQS----RVEGVDHDVLIKLDMTRGNLLQLIRSLRQSGSFSSMNLMADNN 237
            |..|||...:.|:|||.|    |..|.|.:..::.::...:....|.||::         :||:.
Zfish    74 KVFETFETKLLHLESRASRKSKRSSGEDLEFFMRCEVHCSDTDIFINSLKR---------VADDV 129

  Fly   238 LNV---KAPWFPKHASELDNCNHLMTKYEPDLDMNHPGFADKVYRQRRKEIAEIAFAYKYGDPIP 299
            ..|   |.|||||..|:||.||||:|||:||||.:||||:|..||:||..|:|:||.||:|||:|
Zfish   130 RIVQEEKTPWFPKKISDLDTCNHLITKYDPDLDQDHPGFSDSEYRKRRGFISEMAFNYKHGDPLP 194

  Fly   300 FIDYSDVEVKTWRSVFKTVQDLAPKHACAEYRAAFQKLQDEQIFVETRLPQLQEMSDFLRKNTGF 364
            .::|:..|..|||.|::|::.|.|.|||.::..|..:|:.|:::.|.::|||:|:|.||::.|||
Zfish   195 VVEYTPEENATWREVYRTLRSLYPSHACRQFLEALTQLESERLYGEDQIPQLREVSAFLKERTGF 259

  Fly   365 SLRPAAGLLTARDFLASLAFRIFQSTQYVRHVNSPYHTPEPDSIHELLGHMPLLADPSFAQFSQE 429
            .|||.||||:|||||||||||:||.|||:||.::|.|:||||..||||||:|:|||..|||||||
Zfish   260 QLRPVAGLLSARDFLASLAFRVFQCTQYIRHPSAPMHSPEPDCCHELLGHIPMLADQEFAQFSQE 324

  Fly   430 IGLASLGASDEEIEKLSTVYWFTVEFGLCKEHGQIKAYGAGLLSSYGELLHAISDKCEHRAFEPA 494
            |||.|||||||:||||||:|||||||||||::|.:|||||||||||||||:|:|::.:::.|:||
Zfish   325 IGLVSLGASDEDIEKLSTLYWFTVEFGLCKQNGAVKAYGAGLLSSYGELLYALSNEPQYKPFDPA 389

  Fly   495 STAVQPYQDQEYQPIYYVAESFEDAKDKFRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLVH 559
            .|||||||||.|||:|:|:|||||||.|.||:.||:..||.:|::|:|..:||||...|::..:.
Zfish   390 ETAVQPYQDQSYQPVYFVSESFEDAKQKLRRYSSTIQTPFSIRYDPYTCSMEVLDEPSKIQNALG 454

  Fly   560 QMNTEILHLTNAISKL 575
            ||..::..|..|:.:|
Zfish   455 QMRDDLKILHKALGRL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pleNP_001286955.1 Tyr_3_monoox 130..576 CDD:130336 220/406 (54%)
ACT 130..234 CDD:298841 15/60 (25%)
Biopterin_H 243..573 CDD:278766 200/329 (61%)
th2XP_005164791.1 Tyr_3_monoox 16..470 CDD:130336 219/404 (54%)
ACT_TH 16..133 CDD:153202 17/67 (25%)
Biopterin_H 138..467 CDD:278766 199/328 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581372
Domainoid 1 1.000 432 1.000 Domainoid score I563
eggNOG 1 0.900 - - E1_COG3186
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 452 1.000 Inparanoid score I1578
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D361696at33208
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 1 1.000 - - otm25545
orthoMCL 1 0.900 - - OOG6_108343
Panther 1 1.100 - - O PTHR11473
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3954
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.760

Return to query results.
Submit another query.