DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ple and Trh

DIOPT Version :9

Sequence 1:NP_001286955.1 Gene:ple / 38746 FlyBaseID:FBgn0005626 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_612080.1 Gene:Trh / 38121 FlyBaseID:FBgn0035187 Length:555 Species:Drosophila melanogaster


Alignment Length:499 Identity:193/499 - (38%)
Similarity:290/499 - (58%) Gaps:34/499 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 FESVEQEQSESQSQEPEGNQQPTKNDYGLTEDEILLANAASESSDAEAAM--------------Q 157
            :.|.|||.:..|. .|....:......|.:....|..||::.......|:              :
  Fly    14 YRSGEQEWAVKQG-SPLHQLKKDSTTSGSSSHPSLGRNASAPPEPPRLAIGGGGQDNGRQHSPGE 77

  Fly   158 SAALVVRLKEGISSLGRILKAIETFHGTVQHVESRQSRVEGVDHDVLIKLDMTRGNLLQLIRSLR 222
            ..:::..|:..:.:|.|.|:..:.....|.|:|.....:.....|||:.::..:..|.|:::.|.
  Fly    78 RISIIFTLRNQVGNLARALQVFQELGINVLHLELSPLEMATNQADVLVDVECDQRRLDQVVKMLN 142

  Fly   223 QSGSFSSMNLMADNNLNV-KAP--------------WFPKHASELDNCNHLMTKYEPDLDMNHPG 272
            :  ..:|:|..:.|...: :||              |||:..|:||...::: .|..:||.:|||
  Fly   143 R--EVASVNYTSVNTQGLARAPSLSACSSFDFGDMVWFPRKISDLDKAQNVL-MYGSELDADHPG 204

  Fly   273 FADKVYRQRRKEIAEIAFAYKYGDPIPFIDYSDVEVKTWRSVFKTVQDLAPKHACAEYRAAFQKL 337
            |.|.|||:||::.:.||..:|:|:|||.:.|:..|||||.:||..:..|...||..||...:.:|
  Fly   205 FKDPVYRKRREQFSAIANNFKHGNPIPRVQYTPEEVKTWGTVFLELHRLYVLHAVPEYMDNWPEL 269

  Fly   338 QDEQIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLASLAFRIFQSTQYVRHVNSPYHT 402
            :....:.|..:||||::|.:|::.|||.|||.||.|:.||||:.||||:|..|||:||.:.|::|
  Fly   270 EKYCGYREDNVPQLQDVSVYLKRKTGFQLRPVAGYLSPRDFLSGLAFRVFHCTQYIRHSSDPFYT 334

  Fly   403 PEPDSIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKE-HGQIKA 466
            ||||..|||||||||||:.||||||||||||||||||.:||||:|:|:|||||||||: ....|.
  Fly   335 PEPDCCHELLGHMPLLANSSFAQFSQEIGLASLGASDADIEKLATLYFFTVEFGLCKQADSTFKV 399

  Fly   467 YGAGLLSSYGELLHAISDKCEHRAFEPASTAVQPYQDQEYQPIYYVAESFEDAKDKFRRWVSTMS 531
            ||||||||..||.|||:.:.:.:.|:|..|..|......||..||..:|||:||::.|.:..::.
  Fly   400 YGAGLLSSVAELQHAITAENKIKKFDPEVTCQQECIITSYQNAYYYTDSFEEAKEQMRAFAESIQ 464

  Fly   532 RPFEVRFNPHTERVEVLDSVDKLETLVHQMNTEILHLTNAISKL 575
            |||.||:||:|..||||.:..|:..:|.::..::..:.:|:.|:
  Fly   465 RPFGVRYNPYTMSVEVLSNAKKITAVVSELRGDLSIVCSALRKI 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pleNP_001286955.1 Tyr_3_monoox 130..576 CDD:130336 187/476 (39%)
ACT 130..234 CDD:298841 20/117 (17%)
Biopterin_H 243..573 CDD:278766 164/344 (48%)
TrhNP_612080.1 Trp_5_monoox 34..509 CDD:130337 187/478 (39%)
ACT_TPH 79..152 CDD:153201 15/74 (20%)
Biopterin_H 177..506 CDD:278766 163/329 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449663
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3186
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D361696at33208
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11473
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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