DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ple and tph-1

DIOPT Version :9

Sequence 1:NP_001286955.1 Gene:ple / 38746 FlyBaseID:FBgn0005626 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_495584.4 Gene:tph-1 / 174227 WormBaseID:WBGene00006600 Length:532 Species:Caenorhabditis elegans


Alignment Length:521 Identity:190/521 - (36%)
Similarity:280/521 - (53%) Gaps:92/521 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 YVPVEEDVE-----FESVEQEQSESQSQEPEGNQQPTKNDYGLTEDEILLANAASESSDAEAAMQ 157
            :|| ||||:     ..:|.:|.|..:..|.||.|..|           ::..::..|.|.     
 Worm    54 FVP-EEDVKQLFTPTRTVRREASIREGDEEEGVQILT-----------IIVKSSRVSEDI----- 101

  Fly   158 SAALVVRLKEGISSLGRILKAIETFHGTVQHVESRQSRVEGVDH--DVLIKLDMTRGNLLQLIRS 220
             :.::..|.:               |..::|:|:|.|: :|...  |||::::            
 Worm   102 -SKMIANLPD---------------HTRIKHLETRDSQ-DGSSKTMDVLLEIE------------ 137

  Fly   221 LRQSGSFSSMNLMADNNLNVK--------------------------APWFPKHASELDNCNHLM 259
            |...|...:|:||..|.|:|.                          :.||||...:||.|...:
 Worm   138 LFHYGKQEAMDLMRLNGLDVHEVSSTIRPTAIKEQYTEPGSDDATTGSEWFPKSIYDLDICAKRV 202

  Fly   260 TKYEPDLDMNHPGFADKVYRQRRKEIAEIAFAYKYGDPIPFIDYSDVEVKTWRSVFKTVQDLAPK 324
            ..|...||.:||||.|..|||||...||:|..||:|:|||..:|:..|.|||..:::.:::|..|
 Worm   203 IMYGAGLDADHPGFKDTEYRQRRMMFAELALNYKHGEPIPRTEYTSSERKTWGIIYRKLRELHKK 267

  Fly   325 HACAEYRAAFQKLQDEQIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLASLAFRIFQS 389
            |||.::...|:.|:....:.|..:|||:::..||:..|||.:||.||.|:||||||.||:|:|..
 Worm   268 HACKQFLDNFELLERHCGYSENNIPQLEDICKFLKAKTGFRVRPVAGYLSARDFLAGLAYRVFFC 332

  Fly   390 TQYVRHVNSPYHTPEPDSIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVE 454
            ||||||...|::|||||::|||:|||.|.|||.||||||||||||||||:|:::||:|:|:|::|
 Worm   333 TQYVRHHADPFYTPEPDTVHELMGHMALFADPDFAQFSQEIGLASLGASEEDLKKLATLYFFSIE 397

  Fly   455 FGLCKE-------------HGQIKAYGAGLLSSYGELLHAISDKCEHRAFEPASTAVQPYQDQEY 506
            |||..:             |.:.|.||||||||.|||.||:........|:|.....|......:
 Worm   398 FGLSSDDAADSPVKENGSNHERFKVYGAGLLSSAGELQHAVEGSATIIRFDPDRVVEQECLITTF 462

  Fly   507 QPIYYVAESFEDAKDKFRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLVHQMNTEILHLTNA 571
            |..|:...:||:|:.|.|.:.:.|.|||.||:||:||.||||::...:...|:.:.::|..|..|
 Worm   463 QSAYFYTRNFEEAQQKLRMFTNNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGA 527

  Fly   572 I 572
            :
 Worm   528 L 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pleNP_001286955.1 Tyr_3_monoox 130..576 CDD:130336 176/484 (36%)
ACT 130..234 CDD:298841 16/105 (15%)
Biopterin_H 243..573 CDD:278766 156/343 (45%)
tph-1NP_495584.4 Trp_5_monoox 57..532 CDD:130337 188/517 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D361696at33208
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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