DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ple and th2

DIOPT Version :9

Sequence 1:NP_001286955.1 Gene:ple / 38746 FlyBaseID:FBgn0005626 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_031754729.1 Gene:th2 / 100495856 XenbaseID:XB-GENE-22041752 Length:471 Species:Xenopus tropicalis


Alignment Length:495 Identity:208/495 - (42%)
Similarity:311/495 - (62%) Gaps:37/495 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ANLENLPLEEYVPVEEDVEFESVEQEQSESQSQEPEGNQQPTKNDYGLTEDEILLANAASESSDA 152
            |.:.:.|..|:...::.:    :|..:.|:...|....|:.:..|.|..|. |...|        
 Frog     3 AEVGSSPCAEFPGKKKSL----IEDSREENGLSEESSGQKTSIKDDGSNEG-ICTLN-------- 54

  Fly   153 EAAMQSAALVVRLKE-GISSLGRILKAIETFHGTVQHVESRQS---RVEGVDHDVLIKLDMTRGN 213
                    |:..:|. |.|.|...|:.::.|...:.|:|:|.:   :.:|.|.:..:|.|:....
 Frog    55 --------LIFSIKNPGTSGLATCLEVLKKFEAHISHIETRPAAKWKNKGHDLECFVKCDLHSSY 111

  Fly   214 LLQLIRSLRQSGSFSSMNLMADN---NLNVKAPWFPKHASELDNCNHLMTKYEPDLDMNHPGFAD 275
            ...|:         :.::.:||:   ....|.|.||:...:||.|:.|:.||:|.||.:||||.|
 Frog   112 ATMLV---------ADLDKVADDVRTATEEKVPSFPRKLQDLDKCHQLIIKYDPHLDQDHPGFGD 167

  Fly   276 KVYRQRRKEIAEIAFAYKYGDPIPFIDYSDVEVKTWRSVFKTVQDLAPKHACAEYRAAFQKLQDE 340
            :.|::||...||:||.||.||.:|.::|:..|..||:.|:||:::|.|.:||.:|..:.|.|:..
 Frog   168 QEYKKRRTFFAELAFNYKNGDILPRVEYTVEETATWKQVYKTLRNLYPDYACKQYINSLQLLEKY 232

  Fly   341 QIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLASLAFRIFQSTQYVRHVNSPYHTPEP 405
            .||.|..:||||::|:||::.|||:|||.||||.||||||.||||:|.:|||:||.::..|:|||
 Frog   233 GIFREDSVPQLQDVSNFLKERTGFTLRPTAGLLIARDFLACLAFRVFPTTQYLRHPSAFMHSPEP 297

  Fly   406 DSIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKEHGQIKAYGAG 470
            |..||:|||:|:|:|..||||||:||||||||||.:|:||||:||||||||||.::|.|||||||
 Frog   298 DCCHEMLGHIPMLSDKEFAQFSQDIGLASLGASDADIKKLSTLYWFTVEFGLCWQNGSIKAYGAG 362

  Fly   471 LLSSYGELLHAISDKCEHRAFEPASTAVQPYQDQEYQPIYYVAESFEDAKDKFRRWVSTMSRPFE 535
            |||||||||:|.::|.|:|.|:|..||.|||||..:|.:|:|.|:|||:|:|.:.:...|.|||.
 Frog   363 LLSSYGELLYAFTNKPEYRPFDPEMTADQPYQDTTFQSVYFVCENFEDSKEKLKEYAMKMKRPFS 427

  Fly   536 VRFNPHTERVEVLDSVDKLETLVHQMNTEILHLTNAISKL 575
            :|::..|..:|||||:.|::.....:..|:.:|:.|:.|:
 Frog   428 IRYDSFTGSIEVLDSLQKVKDSFSNIKAELRNLSFALGKI 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pleNP_001286955.1 Tyr_3_monoox 130..576 CDD:130336 201/453 (44%)
ACT 130..234 CDD:298841 20/107 (19%)
Biopterin_H 243..573 CDD:278766 177/329 (54%)
th2XP_031754729.1 ACT 17..128 CDD:415594 26/140 (19%)
Biopterin_H 135..464 CDD:395280 176/328 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 431 1.000 Domainoid score I581
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 451 1.000 Inparanoid score I1572
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D361696at33208
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 1 1.000 - - otm47569
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3954
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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