DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8519 and rap1b

DIOPT Version :10

Sequence 1:NP_648054.2 Gene:CG8519 / 38745 FlyBaseID:FBgn0035711 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001008195.1 Gene:rap1b / 493557 XenbaseID:XB-GENE-479036 Length:184 Species:Xenopus tropicalis


Alignment Length:168 Identity:54/168 - (32%)
Similarity:95/168 - (56%) Gaps:10/168 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LTELKIAVIGAPSVGKSALIVRFLTKRYIGEYDHQTENRYKHEAMVDGEPVLFEILDTCPKAEDE 77
            :.|.|:.|:|:..||||||.|:|:...::.:||...|:.|:.:..|||:..:.|||||.  ..::
 Frog     1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTA--GTEQ 63

  Fly    78 YPNAAEL-VQWADGLLLVYSITDRKSFNYIRRAKSDL-----QSDTPVQLCANKVDMVHLRQVSR 136
            :....:| ::...|..||||||.:.:||.::..:..:     ..|.|:.|..||.|:...|.|.:
 Frog    64 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGK 128

  Fly   137 DEGEILAKDF-ECKFSEVSAADHVDQVAEVFNELCKEV 173
            ::|:.||:.: .|.|.|.||...:: |.|:|.:|.:::
 Frog   129 EQGQNLARQWNNCAFLESSAKSKIN-VNEIFYDLVRQI 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8519NP_648054.2 P-loop containing Nucleoside Triphosphate Hydrolases 17..173 CDD:476819 53/162 (33%)
rap1bNP_001008195.1 Rap1 3..167 CDD:133375 54/166 (33%)
Effector region. /evidence=ECO:0000305 32..40 3/7 (43%)

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