DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8519 and rasd1

DIOPT Version :10

Sequence 1:NP_648054.2 Gene:CG8519 / 38745 FlyBaseID:FBgn0035711 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_956826.1 Gene:rasd1 / 393504 ZFINID:ZDB-GENE-040426-1473 Length:265 Species:Danio rerio


Alignment Length:223 Identity:60/223 - (26%)
Similarity:107/223 - (47%) Gaps:44/223 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KIAVIGAPSVGKSALIVRFLTKRYIGEYDHQTENRYKHEAMVDGEPVLFEILDTCPKAEDEYPNA 81
            ::.::|:..|||:|::.|||..|:..:|....|:.::....:.|:....:||||  .....:|..
Zfish    21 RMVILGSTKVGKTAIVSRFLNGRFEEQYTPTIEDFHRKLYSIKGDVYQLDILDT--SGNHPFPAM 83

  Fly    82 AEL-VQWADGLLLVYSITDRKSFNYIRRAKSDLQS-------------DTPVQLCANKVDMVHLR 132
            ..| :...|..:||:|:.:|:||:.::|.|..:..             |.|:.:|.||.|....|
Zfish    84 RRLSILTGDVFILVFSLDNRESFHEVQRLKQQIYETKSCLKNKTKENVDVPLVICGNKGDREFYR 148

  Fly   133 QVSRDEGE-ILAKDFECKFSEVSAA--DHVDQ-------VAEVFNELCKEVLASKRK-------- 179
            :|.|||.| ::|.|.:|.:.|:||.  .:|||       :|::.||:..::   .||        
Zfish   149 EVQRDEIEQLIAGDEQCAYFEISAKRNTNVDQMFQRLFTLAKLPNEMSPDL---HRKVSVQYCDI 210

  Fly   180 -SKQSLLERML------GGARPYSRGKS 200
             .|:||..:.:      |...|::|..|
Zfish   211 LHKKSLKNKKVKDGDAYGIVAPFARRPS 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8519NP_648054.2 P-loop containing Nucleoside Triphosphate Hydrolases 17..173 CDD:476819 51/179 (28%)
rasd1NP_956826.1 Rhes_like 20..265 CDD:133343 60/223 (27%)

Return to query results.
Submit another query.