DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4E4 and AT1G29550

DIOPT Version :9

Sequence 1:NP_648052.1 Gene:eIF4E4 / 38743 FlyBaseID:FBgn0035709 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_174248.1 Gene:AT1G29550 / 839832 AraportID:AT1G29550 Length:240 Species:Arabidopsis thaliana


Alignment Length:204 Identity:70/204 - (34%)
Similarity:109/204 - (53%) Gaps:22/204 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MDNGTETLADSPSSSSEDLKTLSDM--DIRKPVTE---------IVDLRLKHPLENTWTLWYLEN 65
            :|..|.|   |||...:.:..:..:  |.:.|..|         ...::..|..:|:||.|: :|
plant    17 IDPNTTT---SPSPKEKHVSAIKAISGDEKAPSKEKKNYASKKSTTVIQKSHCFQNSWTFWF-DN 77

  Fly    66 DRSKN----WEDMQNEITSFDMVEDFWSLYNHIKQPSEIRVGSDYSLFKKGIQPMWEDDANKFGG 126
            ..||:    |......:.:|..:|:||||||:|..|::...|:|...||..|:|.|||.....||
plant    78 PSSKSNQVIWGSSLRSLYTFGTIEEFWSLYNNIHPPTKWVSGADLYCFKDKIEPKWEDPICANGG 142

  Fly   127 RWVINMGRGSKAELDKLWLDVLLILIGEAFENTEEVCGAVINLRGKSNKISIWTANGHNELAVME 191
            :|.:..   .||.|:..||:.||.|:||.|:..:|:||||:|.|.:.::||:||.|..||.|.:.
plant   143 KWSMMF---PKATLECNWLNTLLALVGEQFDQGDEICGAVLNFRARGDRISLWTKNAANEEAQLS 204

  Fly   192 IGLKLRDLL 200
            ||.:.::||
plant   205 IGKQWKELL 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4E4NP_648052.1 IF4E 56..209 CDD:279921 60/149 (40%)
AT1G29550NP_174248.1 IF4E 67..221 CDD:396291 60/151 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 143 1.000 Domainoid score I1494
eggNOG 1 0.900 - - E1_COG5053
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1633
OMA 1 1.010 - - QHG54586
OrthoDB 1 1.010 - - D1394271at2759
OrthoFinder 1 1.000 - - FOG0000666
OrthoInspector 1 1.000 - - mtm1042
orthoMCL 1 0.900 - - OOG6_100627
Panther 1 1.100 - - O PTHR11960
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X406
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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