DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4E4 and LSP1

DIOPT Version :10

Sequence 1:NP_648052.1 Gene:eIF4E4 / 38743 FlyBaseID:FBgn0035709 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_198412.1 Gene:LSP1 / 833534 AraportID:AT5G35620 Length:198 Species:Arabidopsis thaliana


Alignment Length:189 Identity:64/189 - (33%)
Similarity:102/189 - (53%) Gaps:12/189 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DIRKPVTEIVDL------RLKHPLENTWTLWYLENDRSKN--WEDMQNEITSFDMVEDFWSLYNH 93
            |:.:|:....:|      :..|.||..|:.|: :|...|.  |.....:..:||.|||||.|:..
plant     5 DVNEPLPAAAELPATEAEKQPHKLERKWSFWF-DNQSKKGAAWGASLRKAYTFDTVEDFWGLHET 68

  Fly    94 IKQPSEIRVGSDYSLFKKGIQPMWEDDANKFGGRWVINMGRGSKAELDKLWLDVLLILIGEAFEN 158
            |.|.|::...::..|||.|::|.|||.....||:|...:....|..|||.||:.|:.||||.|:.
plant    69 IFQTSKLTANAEIHLFKAGVEPKWEDPECANGGKWTWVVTANRKEALDKGWLETLMALIGEQFDE 133

  Fly   159 TEEVCGAVINLR--GKSNKISIWTANGHNELAVMEIGLKLRDLLVLPPHQLQYQLHKDT 215
            .:|:||.|.::|  .|.:|:|:||....||..:|.||.|.:::|.: ..::.:..|.|:
plant   134 ADEICGVVASVRPQSKQDKLSLWTRTKSNEAVLMGIGKKWKEILDV-TDKITFNNHDDS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4E4NP_648052.1 IF4E 53..209 CDD:460281 58/159 (36%)
LSP1NP_198412.1 IF4E 27..185 CDD:460281 58/159 (36%)

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