DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4E4 and eif4e1c

DIOPT Version :9

Sequence 1:NP_648052.1 Gene:eIF4E4 / 38743 FlyBaseID:FBgn0035709 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_005156696.1 Gene:eif4e1c / 550549 ZFINID:ZDB-GENE-050417-398 Length:230 Species:Danio rerio


Alignment Length:221 Identity:105/221 - (47%)
Similarity:142/221 - (64%) Gaps:21/221 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GTET---LADSPSSSSEDLKTLSDMDIRKPVTEIVDLRLKHPLENTWTLWYLENDRSKNWEDMQN 76
            ||||   .:|||::               .||...:..:||||:|.|.|||.:||:||:|.:...
Zfish    25 GTETEEVRSDSPTA---------------VVTTSPEQYIKHPLQNRWALWYFKNDKSKSWTENLR 74

  Fly    77 EITSFDMVEDFWSLYNHIKQPSEIRVGSDYSLFKKGIQPMWEDDANKFGGRWVINMGRGSK-AEL 140
            .|:.||.|||||:|||||:|||::..|.||.|||.||:||||||.||.||||::.:.:..: .:|
Zfish    75 LISKFDTVEDFWALYNHIQQPSKLGFGCDYCLFKDGIKPMWEDDRNKLGGRWLMTLSKQQRHNDL 139

  Fly   141 DKLWLDVLLILIGEAF-ENTEEVCGAVINLRGKSNKISIWTANGHNELAVMEIGLKLRDLLVLPP 204
            |:.|::.||.||||:| |.:|:|||||:|:|.|.:||:|||.|..|..|:|.||.:.::.|.||.
Zfish   140 DRYWMETLLCLIGESFDEASEDVCGAVVNVRPKGDKIAIWTGNCQNRDAIMTIGQQYKERLSLPS 204

  Fly   205 HQL-QYQLHKDTMCKQGSVIKAVYCV 229
            ..| .||.|.||..|.||..|.:|.|
Zfish   205 KTLIGYQSHDDTSSKSGSTTKNMYSV 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4E4NP_648052.1 IF4E 56..209 CDD:279921 81/155 (52%)
eif4e1cXP_005156696.1 IF4E 54..210 CDD:279921 81/155 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573587
Domainoid 1 1.000 193 1.000 Domainoid score I3137
eggNOG 1 0.900 - - E1_COG5053
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I3585
OMA 1 1.010 - - QHG54586
OrthoDB 1 1.010 - - D1394271at2759
OrthoFinder 1 1.000 - - FOG0000666
OrthoInspector 1 1.000 - - mtm6577
orthoMCL 1 0.900 - - OOG6_100627
Panther 1 1.100 - - O PTHR11960
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R595
SonicParanoid 1 1.000 - - X406
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.