DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4E4 and ife-3

DIOPT Version :9

Sequence 1:NP_648052.1 Gene:eIF4E4 / 38743 FlyBaseID:FBgn0035709 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_503123.1 Gene:ife-3 / 178536 WormBaseID:WBGene00002061 Length:251 Species:Caenorhabditis elegans


Alignment Length:221 Identity:88/221 - (39%)
Similarity:133/221 - (60%) Gaps:15/221 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TETLADSPSSSSEDLKTLSDMDIRKPVTEIVDLRLKHPLENTWTLWYLENDRSKNWEDMQNEITS 80
            |....:...|:|.|:.. ||..:..      :|..:|||:|.|.||||:.||:|.|||....::.
 Worm     3 TSVAENKALSASGDVNA-SDASVPP------ELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSL 60

  Fly    81 FDMVEDFWSLYNHIKQPSEIRVGSDYSLFKKGIQPMWEDDANKFGGRWVINMGRGSKAE-----L 140
            ||.|||||||||||:....:..||||.|||:||:|||||..|..||||::.:.: .|.:     |
 Worm    61 FDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDK-QKLQRRTQLL 124

  Fly   141 DKLWLDVLLILIGEAF-ENTEEVCGAVINLRGKSNKISIWTANGHNELAVMEIGLKLRDLLVLPP 204
            |..||::|:.::||.| |..:.:||||:|:|.|.:|:|:||.:...:...:.||..|:..|.:|.
 Worm   125 DHYWLELLMAIVGEQFDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPD 189

  Fly   205 HQ-LQYQLHKDTMCKQGSVIKAVYCV 229
            .: |:|::|||:..:..|.:|...|:
 Worm   190 TEILRYEVHKDSSARTSSTVKPRICL 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4E4NP_648052.1 IF4E 56..209 CDD:279921 71/159 (45%)
ife-3NP_503123.1 IF4E 36..195 CDD:279921 71/159 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156153
Domainoid 1 1.000 173 1.000 Domainoid score I2208
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H123817
Inparanoid 1 1.050 197 1.000 Inparanoid score I2501
Isobase 1 0.950 - 0 Normalized mean entropy S964
OMA 1 1.010 - - QHG54586
OrthoDB 1 1.010 - - D1394271at2759
OrthoFinder 1 1.000 - - FOG0000666
OrthoInspector 1 1.000 - - otm14399
orthoMCL 1 0.900 - - OOG6_100627
Panther 1 1.100 - - O PTHR11960
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R595
SonicParanoid 1 1.000 - - X406
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

Return to query results.
Submit another query.