Sequence 1: | NP_476855.1 | Gene: | GluRIA / 38742 | FlyBaseID: | FBgn0004619 | Length: | 991 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001030971.1 | Gene: | GLR3.4 / 839268 | AraportID: | AT1G05200 | Length: | 959 | Species: | Arabidopsis thaliana |
Alignment Length: | 1053 | Identity: | 226/1053 - (21%) |
---|---|---|---|
Similarity: | 381/1053 - (36%) | Gaps: | 286/1053 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 ICASSIFW---------PEFSSAQQQQQTVSL------TEKIPLGAIF--------------EQG 49
Fly 50 TDDV---QSAFKYAMLN---HNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRGVYSMLGA 108
Fly 109 VSPDSFDTLH--SY-SNTFQMPFVTPWFPEKVLAPSSGLLDFAISMRP---DYHQ--AIIDTIQY 165
Fly 166 YGWQSIIYLY----DSHDGLLRLQQIYQE----------LKPGNETFRVQMVKRIANVTMAIEFL 216
Fly 217 HTLEDLGRFSKKRIVLDCPAEMAKEIIVQHVR-DIKLG----RRTYHYLLSGLV----------M 266
Fly 267 DN--HWPSDVVEF--GAINITGFRIVDSNRRAVRDFHDSRKRLEPSGQSQSQNAGGPNSLPAISA 327
Fly 328 QAALMYDAVFVLVEAFNRILRKKPDQFRSNHLQRRSHGGSSSSSATGTNESSALLDCNTSKGWVT 392
Fly 393 PWEQGEKISRVLRKVEIDGLSGEIRFDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAGLLPLHS 457
Fly 458 HNYASSSRSASASTGDYDRNHTYIVSSLLEEP------------------YLSLKQYTYGESLVG 504
Fly 505 NDR----FEGYCKDLADMLAAQLGIKYEIR----LVQDGNYGAENQYAPGGWDGMVGELIRKEAD 561
Fly 562 IAISAMTITAERERVIDFSKPFMTLGISIMIK-KPVKQTPGVFSFLNPLSQEIWISVILSYVGVS 625
Fly 626 FVLYFVTRFPPYEWRIVRRPQADSTAQQPPGIIGGATLSEPQAHVPPVPPNEFTMLNSFWYSLAA 690
Fly 691 FMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVAPIKTPEDLTMQTD---V 752
Fly 753 NYGTLLYGSTWEFFRRSQIGLHNKMWEYMNANQHHSVHTYDE-----GIRRVRQSKGKYALLVES 812
Fly 813 PKNEYVNARPPCDTMKVGRNIDTKGFGVATPIGSPLRKRLNEAVLTLKENGELLRIRNKWWFDKT 877
Fly 878 ECNLDQETSTPNELSLSNVAGIYYILIGGLLLAVIVAIMEFFCR---------------NKTPQL 927
Fly 928 KSPGSNGSAGGVP 940 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIA | NP_476855.1 | PBP1_iGluR_AMPA | 41..453 | CDD:107375 | 97/472 (21%) |
ANF_receptor | 53..434 | CDD:279440 | 89/427 (21%) | ||
PBP2_iGluR_AMPA | 477..879 | CDD:270433 | 99/436 (23%) | ||
Lig_chan | 612..907 | CDD:278489 | 72/302 (24%) | ||
GLR3.4 | NP_001030971.1 | PBP1_GABAb_receptor_plant | 62..450 | CDD:380645 | 98/474 (21%) |
Periplasmic_Binding_Protein_Type_2 | <518..591 | CDD:389745 | 23/81 (28%) | ||
Lig_chan | 615..869 | CDD:365843 | 73/306 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 169 | 1.000 | Inparanoid score | I1556 |
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 1 | 1.000 | - | - | mtm1027 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.870 |