Protein Alignment GluRIA and Ir7f

DIOPT Version :10

• Sequence 1: NP_476855.1
• Gene: GluRIA / 38742
• FlyBaseID: FBgn0004619
• Length: 991
• Species: Drosophila melanogaster
• Sequence 2: NP_001138177.1
• Gene: Ir7f / 7354418
• FlyBaseID: FBgn0259188
• Length: 621
• Species: Drosophila melanogaster
• Alignment Length: 461
• Identity: 76/461 - (16%)
• Similarity: 159/461 - (34%)
• Gaps: 136/461 - (29%)

  Fly   507 RFEGYCKDLADMLAAQLGIKYE---IRLVQDGNYGAENQYAPGGWDGMVGELIRKEADIAISAMT 568
            |..|:...|.:.||.::....|   |.|::...|    :.|.|..:|.:.:|:::..:|::....
  Fly   252 RGSGFEIQLVEHLARRMNFSLELVNIALLRPNAY----RLAEGSSEGPIEKLLQRNVNISMGYFR 312

  Fly   569 ITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLNPLSQEIWISVILS---YVGVSFVLYF 630
            .||.|.:::.....:.:..:..:::....:...:...:.|....:|:.::|:   ::|:..
  Fly   313 KTARRNQLLTTPMSYYSANLVAVLQLERYRIGSLALLVFPFELSVWMLLLLALLIHLGIHL---- 373

  Fly   631 VTRFPPYEWRIVRRPQADSTAQQPPGIIGGATLSEPQAHVPPVPPNEFTMLNSFWYSLAAFMQQG 695
                          |.|....::..|  ||..:                        :|..:...
  Fly   374 --------------PSARRGNEEDGG--GGLQV------------------------VALLLGAA 398

  Fly   696 CDITPPSIAGRIAAAVWWFFTIILISSYTA-----------NLAAFLTVERMVAP---------- 739
            ....|.|...|..||.|.:.:|.|..||.:           |..:| ::::::|.
  Fly   399 LARLPRSWRHRFIAAHWLWASIPLRISYQSLLFHLIRLQLYNTPSF-SLDQLLAEGFQGICTANT 462

  Fly   740 ----IKTPE-----DLTMQTDVNYGTLLYGSTWEFFRRSQIGLHNKMWEYMNANQ-------HHS 788
                ::.|:     |.....|..:       .|:.........:.|:  :..|||       |.|
  Fly   463 QRLLLEMPQLARDPDSIQSVDTPF-------DWDVLNVLTRNRNRKI--FAVANQDVTLSFLHSS 518

  Fly   789 VHTYDEGIRRVRQSKG-KYALLVESPKNEYVNARPPCDTMKVGRNIDTKGFGVATPIGSPLRKRL 852
            .|  ......|:|... :||.:. .||:.::..:...|.    |.:|..||..|.       :|.
  Fly   519 AH--PNAFHVVKQPVNVEYAGMY-MPKHSFLYEKMDDDI----RRLDASGFIHAW-------RRA 569

  Fly   853 NEAVLTLKENGELLRIRNKWWFDKTECNLDQETSTPNELSLSNVAGIYYILIGGLLLAVIVAIME 917
            :.|.:..||...:                    ::...::.:.::|||.::.|..|||.::...|
  Fly   570 SFASVHRKEQVHM--------------------TSRRYINHAKLSGIYMVMAGLYLLAGLLFAGE 614

  Fly   918 FFCRNK 923
            ...|.:
  Fly   615 VLLRQR 620

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluRIA	NP_476855.1	PBP1_iGluR_AMPA	41..456	CDD:380603
		PBP2_iGluR_AMPA	477..879	CDD:270433	67/415 (16%)
		Lig_chan	610..906	CDD:459656	52/336 (15%)
Ir7f	NP_001138177.1	Periplasmic_Binding_Protein_Type_2	231..>358	CDD:473866	18/109 (17%)