Sequence 1: | NP_476855.1 | Gene: | GluRIA / 38742 | FlyBaseID: | FBgn0004619 | Length: | 991 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021323058.1 | Gene: | grin3ba / 566411 | ZFINID: | ZDB-GENE-070912-354 | Length: | 1118 | Species: | Danio rerio |
Alignment Length: | 1062 | Identity: | 225/1062 - (21%) |
---|---|---|---|
Similarity: | 398/1062 - (37%) | Gaps: | 299/1062 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 KFLAYLHF---ICASSIFWPEFSSAQQQQQTVSLTEKIPLGAIF-EQGTDDVQSAFKYAML---- 62
Fly 63 --------NHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQF-SRGVYSMLGAVSPDSFDTL- 117
Fly 118 --HSYSNTFQMPFVT------PW-----FPEKVLA--PSSGLLD--FAISMRPDYHQAIIDTIQY 165
Fly 166 YGWQ---SIIYLYDSHDGLL-RLQQIYQELKPGN-----------ETFRVQMVKRIANVTMAIEF 215
Fly 216 LHTLEDLGRFSKKRIVLDCPAEMAKEIIVQHVRDIKLGRRTYH--YLLSGLVMDNHWPSDVVEFG 278
Fly 279 AINITGFRIVDSNRRAVRDFHDSRKRLEPSGQSQSQNAGGPNSLPAISAQAALMYDAVFVLVEAF 343
Fly 344 NRILRKKPDQFRSNHLQRRSHGGSSSSSATGTNESSALL----DCNTSKGWVTPWEQGEKISRVL 404
Fly 405 RKVEIDGLSGEIRFDEDGRRI--NYTLHVVEMSVNSTLQ----QVAEWR------DDAGLLP--- 454
Fly 455 -------------------------------LHSHNYASS---SRSASASTG----DYDRNHTYI 481
Fly 482 VSSLLEEPYLSLKQYTYGESLVGNDR--FEGYCKDLADMLAAQLGIKYEIRLVQDGNYGAENQYA 544
Fly 545 PGGWDGMVGELIRKEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSFLNPL 609
Fly 610 SQEIWISVILSYVGVSFVLYFVTRFPPYEWRIVRRPQADSTAQQPPGIIGGATLSEPQAHVPPVP 674
Fly 675 PNEFTMLNSFWYSLA-------AFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLT 732
Fly 733 VERMVAPIKTPEDLTMQTDV---------NYGTLLYGSTWEFFRRSQIGLHNKMWEYMNANQHHS 788
Fly 789 VHTYDEGIRRVRQSKGKY-ALLVESPKNEY-VNARPPCDTMKVGRNIDTKGFGVATPIGSPLRKR 851
Fly 852 LNEAVLTLKENGELLRIRNKWW---------FDKTECNLDQETSTPNELSLSNVAGIYYILIGGL 907
Fly 908 LLAVIVAIMEF-FCRNKTPQLK 928 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIA | NP_476855.1 | PBP1_iGluR_AMPA | 41..453 | CDD:107375 | 90/476 (19%) |
ANF_receptor | 53..434 | CDD:279440 | 82/434 (19%) | ||
PBP2_iGluR_AMPA | 477..879 | CDD:270433 | 111/430 (26%) | ||
Lig_chan | 612..907 | CDD:278489 | 69/321 (21%) | ||
grin3ba | XP_021323058.1 | Periplasmic_Binding_Protein_Type_1 | 26..428 | CDD:324556 | 93/496 (19%) |
PBP2_iGluR_NMDA_Nr3 | 457..852 | CDD:270438 | 112/450 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590931 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |