Sequence 1: | NP_476855.1 | Gene: | GluRIA / 38742 | FlyBaseID: | FBgn0004619 | Length: | 991 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021329529.1 | Gene: | grin2aa / 563297 | ZFINID: | ZDB-GENE-070424-129 | Length: | 1460 | Species: | Danio rerio |
Alignment Length: | 954 | Identity: | 214/954 - (22%) |
---|---|---|---|
Similarity: | 364/954 - (38%) | Gaps: | 239/954 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 GAIFEQGTDDVQSAFKYAM-------LNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSR 100
Fly 101 GVYSMLGAVSPDSFDTLHSYSNTFQMPFVTPWFPEKVLAPSSGLLDFAISMRPDYHQAIIDTI-- 163
Fly 164 -QYYGW--QSIIYLYDSHDGLLRLQQIYQELKPGNETFRVQMVKRIANVTMAIEFLHTLEDLGRF 225
Fly 226 SKKRIVLDCPAEMAKEIIVQHVRDIKLGRRTYHYLLSGLVMDNHWPS---DVVEFGAINITGFRI 287
Fly 288 VDSNRRAVRDFHDSRKRLEPSGQSQSQNAGGPNSLPAISAQAALMYDAVFVLVEAFNRILRKKPD 352
Fly 353 QFRSNHLQRRSHGGSSSSSATGTNESSALLDCNTSKGWVTPWEQGEKISRVLRKVEIDGLSGEIR 417
Fly 418 FDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAGLLPLHSHNYASSSRSASASTGDYDRNHTYIV 482
Fly 483 SSLLEEPYLSL-----------------KQYTYGESLVGNDRF-----EGYCKDLADMLAAQLGI 525
Fly 526 KYEIRLVQDGNYGAENQYAPGGWDGMVGELIRKEADIAISAMTITAERERVIDFSKPFMTLGISI 590
Fly 591 MIKKPVKQTPGVFSFLNPLSQEIWISVILSYVGVSFVLYFVTRFPPYEWRIVRRPQADSTAQQPP 655
Fly 656 GIIGGATLSE-PQAHVPPVPPNEFTMLNSFWYSLAAFMQQGCDI-TPPSIAGRIAAAVWWFFTII 718
Fly 719 LISSYTANLAAFLTVERMVAPIKTPEDLTMQTDVNY------GTLLYGSTWEFFRRSQIGLHNKM 777
Fly 778 WEYMNANQHHSVHTYDEGIRRVRQSKGKY-ALLVESPKNEYVNARPP-CDTMKVGRN--IDTKGF 838
Fly 839 GVATPIGSPLRKRLNEAVLTLKENGELLRIRNKWWFDKTECNLDQETSTPNELSLSNVAGIYYIL 903
Fly 904 IGGLLLAVIVAIME--FFCRNKTPQLKSPGSNGSAGGVPGMLAS 945 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIA | NP_476855.1 | PBP1_iGluR_AMPA | 41..453 | CDD:107375 | 84/424 (20%) |
ANF_receptor | 53..434 | CDD:279440 | 78/395 (20%) | ||
PBP2_iGluR_AMPA | 477..879 | CDD:270433 | 107/435 (25%) | ||
Lig_chan | 612..907 | CDD:278489 | 68/306 (22%) | ||
grin2aa | XP_021329529.1 | PBP1_iGluR_NMDA_NR2 | 33..389 | CDD:107373 | 86/436 (20%) |
PBP2_iGluR_NMDA_Nr2 | 400..799 | CDD:270436 | 108/438 (25%) | ||
NMDAR2_C | 836..1460 | CDD:313729 | 8/30 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |