Sequence 1: | NP_476855.1 | Gene: | GluRIA / 38742 | FlyBaseID: | FBgn0004619 | Length: | 991 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016880033.1 | Gene: | GRIN2C / 2905 | HGNCID: | 4587 | Length: | 1337 | Species: | Homo sapiens |
Alignment Length: | 1075 | Identity: | 217/1075 - (20%) |
---|---|---|---|
Similarity: | 372/1075 - (34%) | Gaps: | 314/1075 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SSIF--WPEFSSAQ-QQQQTVSLTEKIPLGAIFEQGTDDVQSAFKYAMLNHNLNVSSRRFELQAY 78
Fly 79 VDV----------INTADAFKLSRLICNQFSRGVYSMLGAVSPDSFDT------LHSYSNTFQMP 127
Fly 128 F----------VTPWFPEKVLAPSSGLLDFAISMRPDYHQAIIDTIQYYGWQSIIYLYDSHDG-- 180
Fly 181 -LLR---------------LQQIYQELKPGNETFRVQMVKRIANVTMAIEFLHTLEDLGRFSKKR 229
Fly 230 IVLDCPAEMAKEIIVQHVRDIKLGRRTYHYLLSGLVMDNH-WPSDVVEFGAINITGFRIVDSNRR 293
Fly 294 AVRDFHDSRKRLEPS---GQSQSQNAGGPNSLPAISAQAALMYDAVFVLVEAFNRILRKKPDQFR 355
Fly 356 SN--------HLQRRSHGGSSSSSATGTNESSALLDCNTSKGWVTPWEQGEKISRVLRKVEIDGL 412
Fly 413 SGEIRFDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAGLLPLHSHNYASSSRSASASTGDYDRN 477
Fly 478 HTYIVSSLLEEPYLSLKQYTYGES----------LVGNDRF-------------EGYCKDLADML 519
Fly 520 AAQLGIKYEIRLVQDGNYGAENQYAPGGWDGMVGELIRKEADIAISAMTITAERERVIDFSKPFM 584
Fly 585 TLGISIMIKKPVKQTPGVFSFLNPLSQEIWISV-ILSYVGVSFVLYFVTRFPP--YEWRIVRRPQ 646
Fly 647 ADSTAQQPPGIIGGATLSEPQAHVPPVPPNEFTMLNSFWYSLAAFMQQGCDI-TPPSIAGRIAAA 710
Fly 711 VWWFFTIILISSYTANLAAFLTVERMVAPI---------------------KT--------PEDL 746
Fly 747 TMQTDVNYGTLLYGSTWEFFRRSQIGLHNKMWEYMNANQHHSVHTYDEGIRRVRQSKGKYALLVE 811
Fly 812 SPKNEYVNARPP-CD--TMKVGRNIDTKGFGVATPIGSPLRKRLNEAVLTLKENGELLRIRNKWW 873
Fly 874 FDKTECNLDQETSTPNELSLSNVAGIYYILIGGLLLAVIVAIME--------------------- 917
Fly 918 ------FFCRNKTPQLKSPGSNGSAGGVPGMLASS 946 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIA | NP_476855.1 | PBP1_iGluR_AMPA | 41..453 | CDD:107375 | 81/467 (17%) |
ANF_receptor | 53..434 | CDD:279440 | 77/436 (18%) | ||
PBP2_iGluR_AMPA | 477..879 | CDD:270433 | 105/460 (23%) | ||
Lig_chan | 612..907 | CDD:278489 | 65/330 (20%) | ||
GRIN2C | XP_016880033.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165155745 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |