Sequence 1: | NP_476855.1 | Gene: | GluRIA / 38742 | FlyBaseID: | FBgn0004619 | Length: | 991 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001263284.1 | Gene: | Grin3a / 242443 | MGIID: | 1933206 | Length: | 1135 | Species: | Mus musculus |
Alignment Length: | 929 | Identity: | 195/929 - (20%) |
---|---|---|---|
Similarity: | 355/929 - (38%) | Gaps: | 246/929 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 135 EKVLAPSSGLLDFAI----------SMRP-DYHQAIIDTIQYYGWQSIIYLYDSHDGLLRLQQIY 188
Fly 189 QELKPGNETFRVQMVKRIANVTMAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEIIVQHVRDIKLG 253
Fly 254 RRTYH--YLLSGLVMDNHWPSDVVEFGAINITGFRIVDSNRRAVRDFH-----------DSRKRL 305
Fly 306 EPSGQSQSQNAGGPNSLPA----------------ISAQAALM-YDAVFVLVEAFNRILRKKPDQ 353
Fly 354 FRSNHLQRR--SHGGSSSS------------------SATGTNESSALL----DCNTSKGWVTPW 394
Fly 395 EQGEKISRVLRKVEIDGLSGEIR-------------------FDEDGRRINYTLHVVEMSVNSTL 440
Fly 441 QQVAEWRD-----DAGLLPLHSHNYASSSRSASASTGDYDRNHTYI-VSSLLEEPY--------- 490
Fly 491 -------LSLKQYTYGESLV---------GND----RFE----GYCKDLADMLAAQLGIKYEIRL 531
Fly 532 VQDGNYGAENQYAPGGWDGMVGELIRKEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPV 596
Fly 597 KQTPGVFSFLNPLSQEIWISVILSYVGVSFVLYFVTRFPPYEWRIVRRPQADSTAQQPPGIIGGA 661
Fly 662 TLSEPQAHVPPVPPNE---FTMLNSFWYSLAAFMQQGCDITPPSI-AGRIAAAVWWFFTIILISS 722
Fly 723 YTANLAAFLTVERM---VAPIKTPEDLTMQTDVNYGTLLYGSTWEFFRRSQIGLHNKMWEYMNAN 784
Fly 785 QHHSVHTYDEGIRRVRQSKGKY-ALLVESPKNEY-VNARPPCDTMKVGRNIDTKGFGVATPIGSP 847
Fly 848 LRKRLNEAVLTLKENGELLRIRNKWWFDKTECNLDQETSTPN-ELSLSNVAGIYYILIGGLLLAV 911
Fly 912 IVAIMEFFC-RNKTPQLKS 929 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIA | NP_476855.1 | PBP1_iGluR_AMPA | 41..453 | CDD:107375 | 76/406 (19%) |
ANF_receptor | 53..434 | CDD:279440 | 73/382 (19%) | ||
PBP2_iGluR_AMPA | 477..879 | CDD:270433 | 106/444 (24%) | ||
Lig_chan | 612..907 | CDD:278489 | 64/304 (21%) | ||
Grin3a | NP_001263284.1 | PBP1_iGluR_NMDA_NR3 | 30..497 | CDD:107372 | 76/407 (19%) |
PBP2_iGluR_NMDA_Nr3 | 512..908 | CDD:270438 | 104/438 (24%) | ||
Lig_chan | 676..942 | CDD:278489 | 64/304 (21%) | ||
PPP2CB binding site. /evidence=ECO:0000250|UniProtKB:Q9R1M7 | 951..987 | 4/15 (27%) | |||
GIT1-binding. /evidence=ECO:0000250|UniProtKB:Q9R1M7 | 1082..1115 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846178 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |