Protein Alignment GluRIA and F59E12.8

DIOPT Version :9

• Sequence 1: NP_476855.1
• Gene: GluRIA / 38742
• FlyBaseID: FBgn0004619
• Length: 991
• Species: Drosophila melanogaster
• Sequence 2: NP_001364714.1
• Gene: F59E12.8 / 186629
• WormBaseID: WBGene00019123
• Length: 379
• Species: Caenorhabditis elegans
• Alignment Length: 413
• Identity: 80/413 - (19%)
• Similarity: 144/413 - (34%)
• Gaps: 111/413 - (26%)

  Fly   551 MVGELIRKEADIAISAMTITAERERVIDFSKPF-MTLGISIMIKKPVKQTPGVFSFLNPLSQEIW 614
            |:|::.:...|:|.....:||:|..|:.|:.|. ..:....:|..|.|....||.| :|.|..:|
 Worm     1 MLGDIQKGRIDMACGRFRMTADRANVLTFTYPTQFEVNQVYLITDPQKSVDVVFLF-HPFSTTVW 64

  Fly   615 ISVILSYVGVSFVLYFVTRFPPYEWRIVRRPQADSTAQQPPGIIGGATLSEPQAHVPPVPPNEFT 679
            :.:.|:.:.|: :::|:.||  .|::..:..::.....|
 Worm    65 LLLSLTVLVVA-IVFFILRF--VEFKSTKETESSYECIQ-------------------------- 100

  Fly   680 MLNSFWYSLAAFMQQGCDITPPS--IAGRIAAAVW---WFFTIILISSYTANLAAFLTV-ERMVA 738
              ||.:..|.:.......:...|  .|..:.:.:|   ||.  :.|..||:.|:..:.| ::...
 Worm   101 --NSIFQVLLSTFNLEIRVAKKSTFFAFHLFSTIWLLAWFH--VFIDFYTSELSGMMVVSDKRQV 161

  Fly   739 PIKTPEDLTMQTDVNYGTLLYGSTWEFFRRSQIGLHNKMWEYMNANQHHSVHTYDEGIRRVRQSK 803
            |.          |..||.:      :..|:....|.....:.:....|....:....|.....||
 Worm   162 PF----------DNFYGFI------DHLRKGNYRLFTPSADRIPECPHEITTSKCNAIFSEILSK 210

  Fly   804 --GKYALLVESPKNEYVNARPPCDTMKVGRNIDTKGFG--VATPIGS------------------ 846
              .:|..|::....|:|::          |.|...|||  .|..|.|
 Worm   211 HPPEYGDLMQLNDREFVSS----------RKIPLVGFGWYPAQRISSKFSIWTQELFHSDIWLIR 265

  Fly   847 ---------------PLRKRLNEAVLTLKENGELLRIRNKWWFDKTECNLDQETSTPNE--LSLS 894
                           |....|||.:  :|......||.|.:.....|..|   |..|::  .||:
 Worm   266 DFPVCPAAYIVRPTFPYLDELNEMI--IKVLPAFSRIDNHYTPAYPELTL---TGKPSKSSFSLN 325

  Fly   895 NVAGIYYILIGGLLLAVIVAIME 917
            .::.|:.|.:.|..::.:..|.|
 Worm   326 QLSSIFLIHLLGAFVSTLFLIAE 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluRIA	NP_476855.1	PBP1_iGluR_AMPA	41..453	CDD:107375
		ANF_receptor	53..434	CDD:279440
		PBP2_iGluR_AMPA	477..879	CDD:270433	69/371 (19%)
		Lig_chan	612..907	CDD:278489	59/339 (17%)
F59E12.8	NP_001364714.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1052
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900