Sequence 1: | NP_476855.1 | Gene: | GluRIA / 38742 | FlyBaseID: | FBgn0004619 | Length: | 991 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005170953.1 | Gene: | gria2a / 170450 | ZFINID: | ZDB-GENE-020125-3 | Length: | 893 | Species: | Danio rerio |
Alignment Length: | 979 | Identity: | 388/979 - (39%) |
---|---|---|---|
Similarity: | 556/979 - (56%) | Gaps: | 160/979 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 IPLGAIFEQGTDDVQSAFKYAMLNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRGVYS 104
Fly 105 MLGAVSPDSFDTLHSYSNTFQMPFVTPWFPEKVLAPSSGLLDFAISMRPDYHQAIIDTIQYYGWQ 169
Fly 170 SIIYLYDSHDGLLRLQQIYQ----------ELKPGN-------ETFRVQMVKRIANVTMAIEFLH 217
Fly 218 TLEDLGRFSKKRIVLDCPAEMAKEIIVQHVRDIKLGR--RTYHYLLS--GLVMDNHWPSDV--VE 276
Fly 277 FGAINITGFRIVDSNRRAVRDFHDSRKRLE----PSGQSQSQNAGGPNSLPAISAQAALMYDAVF 337
Fly 338 VLVEAFNRILRKKPDQFRSNHLQRRSHGGSSSSSATGTNESSALLDCNTSKGWVTPWEQGEKISR 402
Fly 403 VLRKVEIDGLSGEIRFDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAGLLPLHSHNYASSSRSA 467
Fly 468 SASTGDYDRNHTYIVSSLLEEPYLSLKQYTYGESLVGNDRFEGYCKDLADMLAAQLGIKYEIRLV 532
Fly 533 QDGNYGAENQYAPGGWDGMVGELIRKEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVK 597
Fly 598 QTPGVFSFLNPLSQEIWISVILSYVGVSFVLYFVTRFPPYEWRIVRRPQADSTAQQPPGIIGGAT 662
Fly 663 LSEPQAHVPPVPPNEFTMLNSFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANL 727
Fly 728 AAFLTVERMVAPIKTPEDLTMQTDVNYGTLLYGSTWEFFRRSQIGLHNKMWEYM-NANQHHSVHT 791
Fly 792 YDEGIRRVRQSKGKYALLVESPKNEYVNARPPCDTMKVGRNIDTKGFGVATPIGSPLRKRLNEAV 856
Fly 857 LTLKENGELLRIRNKWWFDKTEC-----NLDQETSTPNELSLSNVAGIYYILIGGLLLAVIVAIM 916
Fly 917 EFFCRNKTPQLKSPGSNGSAGGVPGMLASSTYQRDSLSDAIMHSQAKLAMQASSEYDERLVGVEL 981
Fly 982 ASNV 985 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIA | NP_476855.1 | PBP1_iGluR_AMPA | 41..453 | CDD:107375 | 129/438 (29%) |
ANF_receptor | 53..434 | CDD:279440 | 121/407 (30%) | ||
PBP2_iGluR_AMPA | 477..879 | CDD:270433 | 224/402 (56%) | ||
Lig_chan | 612..907 | CDD:278489 | 164/300 (55%) | ||
gria2a | XP_005170953.1 | Periplasmic_Binding_Protein_Type_1 | 23..391 | CDD:299141 | 129/439 (29%) |
ANF_receptor | 51..373 | CDD:279440 | 118/388 (30%) | ||
PBP2_iGluR_AMPA | 406..783 | CDD:270433 | 222/399 (56%) | ||
Lig_chan | 538..816 | CDD:278489 | 164/300 (55%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590942 | |
Domainoid | 1 | 1.000 | 371 | 1.000 | Domainoid score | I851 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 698 | 1.000 | Inparanoid score | I657 |
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 1 | 1.010 | - | - | D89427at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6377 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.770 |