Sequence 1: | NP_476855.1 | Gene: | GluRIA / 38742 | FlyBaseID: | FBgn0004619 | Length: | 991 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017169765.1 | Gene: | Grin2c / 14813 | MGIID: | 95822 | Length: | 1307 | Species: | Mus musculus |
Alignment Length: | 1000 | Identity: | 213/1000 - (21%) |
---|---|---|---|
Similarity: | 363/1000 - (36%) | Gaps: | 264/1000 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 74 ELQAYVDVINTADAFKLSRLICNQFSRGVYSMLGAVSPDSFDT------LHSYSNTFQMPF---- 128
Fly 129 ------VTPWFPEKVLAPSSGLLDFAISMRPDYHQAIIDTIQYYGWQSIIYLYDSHDG---LLR- 183
Fly 184 --------------LQQIYQELKPGNETFRVQMVKRIANVTMAIEFLHTLEDLGRFSKKRIVLDC 234
Fly 235 PAEMAKEIIVQHVRDIKLGRRTYHYLLSGLVMDNH-WPSDVVEFGAINITGFRIVDSNRRAVRDF 298
Fly 299 HDSRKRLEPS---GQSQSQNAGGPNSLPAISAQAALMYDAVFVLVEAFNRILRKKPDQFRSN--- 357
Fly 358 -----HLQRRSHGGSSSSSATGTNESSALLDCNTSKGWVTPWEQGEKISRVLRKVEIDGLSGEIR 417
Fly 418 FDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAGLLPLHSHNYASSSRSASASTGDYDRNHTYIV 482
Fly 483 SSLLEEPYLSLKQYTYGES----------LVGNDRF-------------EGYCKDLADMLAAQLG 524
Fly 525 IKYEIRLVQDGNYGAENQYAPGGWDGMVGELIRKEADIAISAMTITAERERVIDFSKPFMTLGIS 589
Fly 590 IMIKKPVKQTPGVFSFLNPLSQEIWISV-ILSYVGVSFVLYFVTRFPP--YEWRIVRRPQADSTA 651
Fly 652 QQPPGIIGGATLSEPQAHVPPVPPNEFTMLNSFWYSLAAFMQQGCDI-TPPSIAGRIAAAVWWFF 715
Fly 716 TIILISSYTANLAAFLTVERMVAPIKTPEDLTMQ------TDVNYGTLLYGSTWEFFRRSQIGLH 774
Fly 775 NKMWEYMNANQHHSVHTYDEGIRRVRQSKGKYALLVESPKNEYVNARPP-CD--TMKVGRNIDTK 836
Fly 837 GFGVATPIGSPLRKRLNEAVLTLKENGELLRIRNKWWFDKTECNLDQETSTPNELSLSNVAGIYY 901
Fly 902 ILIGGLLLAVIVAIME---------------------------FFCRNKTPQLKSPG-------S 932
Fly 933 NGSA-GGVPGMLASSTYQRDSLSDA 956 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIA | NP_476855.1 | PBP1_iGluR_AMPA | 41..453 | CDD:107375 | 76/424 (18%) |
ANF_receptor | 53..434 | CDD:279440 | 72/405 (18%) | ||
PBP2_iGluR_AMPA | 477..879 | CDD:270433 | 107/437 (24%) | ||
Lig_chan | 612..907 | CDD:278489 | 66/307 (21%) | ||
Grin2c | XP_017169765.1 | PBP1_iGluR_NMDA_NR2 | 90..446 | CDD:380601 | 77/431 (18%) |
PBP2_iGluR_NMDA_Nr2 | 462..868 | CDD:270436 | 108/440 (25%) | ||
NMDAR2_C | 905..>980 | CDD:371139 | 14/73 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846188 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |