DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rexo5 and SDN2

DIOPT Version :10

Sequence 1:NP_648050.1 Gene:Rexo5 / 38740 FlyBaseID:FBgn0286051 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_196173.1 Gene:SDN2 / 830437 AraportID:AT5G05540 Length:466 Species:Arabidopsis thaliana


Alignment Length:364 Identity:95/364 - (26%)
Similarity:152/364 - (41%) Gaps:66/364 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 KIIDEIAKIPL--TNAQARRLIDEH------GSLESAVELNKDPTL-FVKTIFPIES----SKSE 298
            |::....|:.|  .|...:..:|.:      .||....:..||..: |:.|:...|.    :||.
plant    15 KLVKVAQKLGLKGENGTWKEFLDFYDKQLGSSSLSDPSKRRKDDLVAFLTTLKKKEDLQLLAKSL 79

  Fly   299 SDDMHEDDKFPRTKL------LLSALQMVDEGYPI----PLQGE--LHTRFQNFKFTKDLYAPVT 351
            ..|....:||.:..|      .|..:.:..:.||:    |...|  :.|.....|..       .
plant    80 KLDNDVFEKFKKKSLDETAEQRLVRMTLTHDEYPLDYLFPSNAEDWVRTGLGKKKME-------P 137

  Fly   352 NRSPMFGVDCEMCHTEAGCNELTRISIVNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVT 416
            .:..|..:||||...|.|...:.|::.|:.:.:.:.:..|.||..:.||.|..:|:||:.:|:.|
plant   138 TKIEMIAIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKAT 202

  Fly   417 KRLDVVQKEVSELLPPDAILVGQSLNSDLNAMKMMHPYVIDTSVCF--NTSGVRR----RKTKLK 475
            ..:..:|:::...:..|.||||||||.||..:|:.|..|||||:.|  |..|.||    ::..|.
plant   203 ISVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKRPSLN 267

  Fly   476 DLAKTFLQEIIQENIDGHDSIEDSRATLKLVKKKLAN----SIEFGDQILTQHKQ---------- 526
            .|.|..|...:|:....|:.:.|:.|.:|||...|.|    |:....::|...|.          
plant   268 YLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNGAETSVPLSKEMLEAEKSKLYLHRIPCN 332

  Fly   527 --LQELANASSGDTISNNLFAHVAKRDKR------TAIV 557
              .:||....|.|      ..|..|..|:      :|||
plant   333 VPYEELNGVVSRD------IPHEVKPSKKQDRHYYSAIV 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rexo5NP_648050.1 REX1_like 357..507 CDD:99848 53/155 (34%)
SDN2NP_196173.1 REX1_like 143..299 CDD:99848 53/155 (34%)

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