DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rexo5 and rexo1

DIOPT Version :10

Sequence 1:NP_648050.1 Gene:Rexo5 / 38740 FlyBaseID:FBgn0286051 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001119888.1 Gene:rexo1 / 564551 ZFINID:ZDB-GENE-030131-1650 Length:1207 Species:Danio rerio


Alignment Length:717 Identity:158/717 - (22%)
Similarity:265/717 - (36%) Gaps:227/717 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KEHMSTKQHERNEKKKKKLAALANLM------ELNDRDR--LHEAELAKKRDAEVEVEEKSTAKA 58
            |:.:|...|:..:|.|::..:..:|.      |.::.|.  :.::..|.||...|..:.||::.:
Zfish   502 KKSISVLDHKEAKKTKQRNLSHVDLFGADSAEEEDEEDERIVRKSASAFKRGGLVNNKRKSSSSS 566

  Fly    59 EDG-----DDGFI------------------------------VVGSKRKPRNRRQ-NNELEADS 87
            ||.     |||.:                              .|..:.|.|..:| :.|.|.:.
Zfish   567 EDDSEVDEDDGGVDTEDFSCLQDVMEYDSDPMEECLRIFNESKEVKMEDKGRQAKQPSRETEEED 631

  Fly    88 QTAPGTSDPEEPVNKK-IRNYDAGGDSLPLEIGSLSEDQYNQLSAELRRRKRELENVPALRLREM 151
            :....|.....|..|| :.::.|.|.| ...:.|:...|....:.|:..::.:.....|.:|.|.
Zfish   632 EETESTLTTLFPGQKKRVSHFKAQGKS-ETTMNSVPMQQRRMTAQEICYQRMQKAQQQAAQLAEA 695

  Fly   152 GQRASLETPQDARTPIFLTDIQNLLMCALIGQKSPC--RPDRWCSVEKWLSLSHSVV----VILE 210
            .:.||...   :..|:.          .:.|:|...  ||:......|....|..|:    |:.:
Zfish   696 VKTASASA---SSNPVL----------GISGEKRRVAHRPNASLPSSKPADASSRVLSPTRVVTD 747

  Fly   211 GLS---------LYHYLSNETQFEA--TNRIFSTKLEMILPPQEEGQKI------------IDEI 252
            .||         |...:|...|...  |..:.|:.::..:.|.|.|.|:            |||.
Zfish   748 QLSVKAQTSAGILSKTISTTVQKRVAHTPTLKSSTMKRPVIPTEFGAKVPTIVRQRYLNIFIDEC 812

  Fly   253 AKIPLTNAQARRLIDEH------GSLESAVELNKDPTLFVKTIFPIES--------------SKS 297
            .|...:...|.:|..|.      .|....:.||    :.|.|:..:.|              |.:
Zfish   813 LKFCSSEQDAFQLALEEEKVVYDRSSSKNIYLN----VAVNTVKKLRSRSTPASPVTKSPAVSVN 873

  Fly   298 ESDDMHED---------------------DKFPRTKLLLSAL--------QMVDEGYPIP---LQ 330
            :....||:                     |..|:..:|...|        |:.:.|||:|   :.
Zfish   874 KKAQSHEEVLGGRLAATTSFTINRSGKQHDVNPKGAILYKKLRKYAMTEEQLQEHGYPLPHPEIS 938

  Fly   331 G-----ELHTRFQNFKFTK----------------------------------------DLY--- 347
            |     .|..:..|..|:|                                        .||   
Zfish   939 GHAVVHNLPEKKNNDPFSKICCRCGAEYKVNSNGSCVRKEECSHHWGRLRRNRVPGGWETLYNCC 1003

  Fly   348 ----------------------------------APVTNRSPMFGVDCEMCHTEAGCNELTRISI 378
                                              .||...:.::.:|||||:|:.|. ||||:::
Zfish  1004 SGAVGSPGCEVCKQHVQDGRKESLDGFVKTFSKPLPVDGNAGVYALDCEMCYTKQGL-ELTRVTV 1067

  Fly   379 VNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVTKRLDVVQKEVSELLPPDAILVGQSLNS 443
            :|...:.||:|.|.|.:|:.||.|::||:||:.:|..|..|..||..:..:...|:||:|.||.|
Zfish  1068 INSELKVVYDTFVKPGSRVVDYNTRFSGVTADDLENTTISLRDVQAVLLSMFSADSILIGHSLES 1132

  Fly   444 DLNAMKMMHPYVIDTSVCFNTSGVRRRKTKLKDLAKTFLQEIIQENIDGHDSIEDSRATLKLVKK 508
            ||.|:|::|..|:||::.|........|..|::|...:|:.|||:|:.||||.||:||.::|:..
Zfish  1133 DLFALKLIHSMVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDNVGGHDSSEDARACMELMIW 1197

  Fly   509 KL 510
            |:
Zfish  1198 KI 1199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rexo5NP_648050.1 REX1_like 357..507 CDD:99848 63/149 (42%)
rexo1NP_001119888.1 EloA-BP1 785..946 CDD:464914 30/164 (18%)
REX1_like 1047..1195 CDD:99848 62/148 (42%)

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