Protein Alignment Rexo5 and PAN2

DIOPT Version :10

• Sequence 1: NP_648050.1
• Gene: Rexo5 / 38740
• FlyBaseID: FBgn0286051
• Length: 681
• Species: Drosophila melanogaster
• Sequence 2: NP_610427.2
• Gene: PAN2 / 35893
• FlyBaseID: FBgn0033352
• Length: 1241
• Species: Drosophila melanogaster
• Alignment Length: 555
• Identity: 122/555 - (21%)
• Similarity: 196/555 - (35%)
• Gaps: 198/555 - (35%)

  Fly    16 KKKKLAALANLMELNDRDRLHEAELAKKRDAEVEVEEKSTA---KAEDGDDGFIVVGSKRKPRNR 77
            ::|....|...|.:||:             .||:|:.:|.|   |:|..::      :::.|...
  Fly   837 RQKSWFPLTFTMGINDQ-------------GEVQVQTQSDASSGKSEQEEE------TEKPPTKG 882

  Fly    78 RQNNELEADSQTAPGTSDPEEPVNKKIRNYDAGGDSLPLEIGSLSEDQYNQLSAELRRRKRELEN 142
            ..||.:.|              ::..:...|.|             .|.|.:|         |.|
  Fly   883 LDNNRMYA--------------LHAVVCQVDDG-------------TQKNLVS---------LIN 911

  Fly   143 VP----ALRLREMGQRASLETPQDARTPIFLTDIQNLLMCALIGQKSPCRPDRWCSVEKWLSLSH 203
            |.    .::|.|     |.:.|| ::..|| .|.          ..||..|..  ||  |.:|..
  Fly   912 VQRPYHTMKLAE-----SADDPQ-SQWYIF-NDF----------SISPVSPQE--SV--WFTLDW 955

  Fly   204 SVVVILEGLSLYHYLSNETQFEATNRIFSTKLEMILP-------PQEEGQKIIDEIAKIPLTNAQ 261
            .|..||    .|.::.::::..:|.....|:.|..:|       |.......::||....|.|
  Fly   956 KVPCIL----FYRHVEDDSESASTTSSTVTESEETIPSESSSGSPTNLSNPFLEEIVSPMLGN-- 1014

  Fly   262 ARRLIDEHGSLESAVELNKDPTLFVKTIFPIESSKSESDDMHEDDKFPRTKLLLSALQMVDEGYP 326
                            |:.|.||     .|::|           |:.|::            |..
  Fly  1015 ----------------LSADATL-----QPLQS-----------DEMPQS------------GDL 1035

  Fly   327 IPLQGELHTRFQNFKFTKDLYAPVTNRSPMFG--VDCEMCHTEAGCNELTRISIVN--------- 380
            :.:..|..|           ..|..|.....|  ...:.||.     .:.|||.:.
  Fly  1036 VAMDAEFVT-----------LNPEENEIRPDGKTATIKPCHM-----SVARISCIRGQGPAEGVP 1084

  Fly   381 --ENYETVYETLVLPNNRITDYLTQYSGITAEIMEQ--VTKRLDVVQ---KEVSELLPPDAILVG 438
              ::|.:..|       ::.|||||:|||....::.  ..|||..::   :::..|:....|.||
  Fly  1085 FMDDYISTQE-------KVVDYLTQFSGIKPGDLDANFSKKRLTALKYSYQKLKYLVDVGVIFVG 1142

  Fly   439 QSLNSDLNAMKMMHP--YVIDTSVCFNTSGVRRRKTKLKDLAKTFLQEIIQENIDGHDSIEDSRA 501
            ..|.:|...:.:..|  .:|||...|:..  ..|...|:.||..||...||.  :.||||||:|.
  Fly  1143 HGLKNDFRVINIYVPSEQIIDTVHLFHMP--HHRMVSLRFLAWHFLGTKIQS--ETHDSIEDART 1203

  Fly   502 TLKLVK--------KKLANSIEFGDQILTQHKQLQ 528
            ||:|.|        ||.||:::   .:..:.||||
  Fly  1204 TLQLYKHYLKLQEEKKFANALK---NLYERGKQLQ 1235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rexo5	NP_648050.1	REX1_like	357..507	CDD:99848	48/169 (28%)
PAN2	NP_610427.2	WD40	63..>270	CDD:475233
		WD40 repeat	148..183	CDD:293791
		WD40 repeat	187..221	CDD:293791
		WD40 repeat	227..273	CDD:293791
		WD40 repeat	278..314	CDD:293791
		UCH_1	505..940	CDD:463872	32/174 (18%)
		zf-CCCH_2	799..816	CDD:464217
		PAN2_exo	1036..1209	CDD:99846	52/199 (26%)