DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rexo5 and Rexo5

DIOPT Version :10

Sequence 1:NP_648050.1 Gene:Rexo5 / 38740 FlyBaseID:FBgn0286051 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_038934563.1 Gene:Rexo5 / 309036 RGDID:1305412 Length:846 Species:Rattus norvegicus


Alignment Length:505 Identity:159/505 - (31%)
Similarity:231/505 - (45%) Gaps:117/505 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 ELENVPALRLREMGQRASLETPQDART-----------------------PIFLTD--------I 172
            |||       .|...|...|||..|.|                       .|..||        :
  Rat     2 ELE-------EEENPRKRKETPNSALTTELDRPSWDVQDPEPQAKKARLSTILFTDNCEVTHRQL 59

  Fly   173 QNLLMCALIGQKSPCRPDRWCSVEKWLSLSHSVVVILEGLSLYHYLSNETQFEATNRIFSTKLEM 237
            ..||..|::|:.:..:|. ||.:.....|::.||.||:|:|..|:.....:|....:.|..|.. 
  Rat    60 CELLKYAILGKSTLPKPS-WCQLLHQKQLNNVVVFILKGMSQLHFYRFYLEFRFLRKTFRHKFS- 122

  Fly   238 ILPP-------------QEEGQKIIDEIAKIPLTNAQARRLIDEHGSLESAVELNKDPTLFVKTI 289
             |||             :::..:......:.||.:|          :|:|:::|..||      |
  Rat   123 -LPPPTSSFLFDIIGLQKKKSARGCPRTVEGPLISA----------TLKSSIDLQNDP------I 170

  Fly   290 FPIESSKSESDDMHEDDKFPRTKLLLSALQMVDEGYPIPLQGELHTRFQNFKFTKDLYAP-VTNR 353
            ......|:.|          .|:.||:..:|  :.:..||||.  ...:||...|  |:. :|:.
  Rat   171 IQKYGYKNVS----------LTRCLLTKEEM--KTFHFPLQGS--PNCENFILLK--YSGFITDS 219

  Fly   354 SPMFGVDCEMCHTEAGCNELTRISIVNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVTKR 418
            ||:||:|||:|.|..| .||||||:|.|....:.:.||.|:.:|.||||.:||||.||:..||.:
  Rat   220 SPLFGLDCEVCLTSMG-KELTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKEILNPVTTK 283

  Fly   419 LDVVQKEVSELLPPDAILVGQSLNSDLNAMKMMHPYVIDTSVCFNTSGVRRRKTKLKDLAKTFLQ 483
            |..|||.:.|||||||:|||..|:.||..:|::||||||||:.:  .|.:.|:.||..|||..|.
  Rat   284 LKDVQKLLRELLPPDAVLVGHCLDLDLRVLKIIHPYVIDTSLLY--IGKQGRRFKLTFLAKVILG 346

  Fly   484 EIIQ-ENIDGHDSIEDSRATLKLVK-------KKLANSIEFGDQILTQHKQLQELANASSGDTIS 540
            :.|| .|..|||.|||:|..|:||:       ||:|   ||..:.|..:   ||..| ..|.|..
  Rat   347 KDIQCPNKLGHDGIEDARTALELVQYFLKYGPKKIA---EFNLEALAAN---QEQGN-KEGATHM 404

  Fly   541 NNLFAHVAKRDKRTAIVT--VGELQ----------PRLKEVIEKAGEAAP 578
            .::...:....::...:|  :.||.          ...|||:|:|....|
  Rat   405 RSVLECLDSMGQKLLFLTQDIDELSSYRNCQTVKCSSNKEVLEQARVEVP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rexo5NP_648050.1 REX1_like 357..507 CDD:99848 78/150 (52%)
Rexo5XP_038934563.1 REX1_like 223..371 CDD:99848 77/155 (50%)
RRM_SF 508..578 CDD:473069
RRM_SF 604..674 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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